Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8 152 5e-32 seq161 93.3 4e-14 >seq8 Length=2239894 Score = 152 bits (168), Expect = 5e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| ||||||||| || |||||||| || || | | |||||| | || Sbjct 1730488 AAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCATC 1730429 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| ||||| || ||| | || || |||||||| ||||| || || ||||| || || Sbjct 1730428 TTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 1730369 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || |||||| ||| | ||| ||| ||| || ||| ||| || | || Sbjct 1730368 CTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGT 1730309 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||| |||| ||||||||||||||||||||| Sbjct 1730308 CTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| ||||||||| || ||||| || || || | | |||||| | || Sbjct 1733783 AAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCATC 1733724 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| ||||| || ||| | || || |||||||| ||||| || || ||||| || || Sbjct 1733723 TTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 1733664 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || |||||| ||| | ||| ||| ||| || ||| ||| || | || Sbjct 1733663 CTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGT 1733604 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||| |||| ||||||||||||||||||||| Sbjct 1733603 CTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| |||||||| || |||||||| || || | | |||||| | ||| Sbjct 1707823 AGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCCATCT 1707764 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| || || ||| | || || |||||||| ||||| || || |||||||| || Sbjct 1707763 TCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTTGTCC 1707704 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| || || | ||||| || || ||||||| ||||| || Sbjct 1707703 TGGA-TCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTATCGT 1707645 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || || || || ||||| |||||||| Sbjct 1707644 CTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 64296 GCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTA 64355 ||| || || ||| |||| || || || || || || || ||||| ||||| ||||||| Sbjct 1706625 GCTACTCACCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTA 1706566 Query 64356 TTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGC 64415 ||||| ||| ||| || | |||||| ||| ||||| || | |||| || |||| Sbjct 1706565 TTTTTGCCTTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGC 1706506 Query 64416 CGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || |||||||| |||||||| ||||| Sbjct 1706505 CCGTTAAAGTTTTCACGAAAATCTGCAT 1706478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| || ||| |||| | |||||||| || || |||||||||||||| ||||| | ||| Sbjct 1706279 CTTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTG-AATTT 1706221 Query 64360 TTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGG 64418 ||||||| ||| || | |||||| || || ||||||| |||| || || || | Sbjct 1706220 TTGCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAG 1706161 Query 64419 TCAAAGTTTTTACGAAAATTTGCAT 64443 | || ||||| || || || ||||| Sbjct 1706160 TTAACGTTTTCACAAAGATCTGCAT 1706136 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| | || || ||||| ||||| || || || ||||| || |||||||||||| | Sbjct 1707044 CCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGCC 1706985 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || ||| ||| | ||||| || || ||||| | |||| |||||||| || | Sbjct 1706984 TTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAGC 1706925 Query 64424 GTTTTTACGAAAATTTGCATT 64444 ||||| || |||||||||||| Sbjct 1706924 GTTTTCACAAAAATTTGCATT 1706904 >seq161 Length=136094 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 64311 AAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAA 64370 |||| | |||||||||||||| ||||||||||| || || || || ||| ||| ||| Sbjct 38049 AAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTGACAT 37990 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 ||| | ||||| || || ||||| | |||| ||||| || ||||| ||||| | Sbjct 37989 TCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAATGTTTTCA 37930 Query 64431 CGAAAATTTGCATT 64444 ||||||| |||||| Sbjct 37929 CGAAAATCTGCATT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499636368494000