Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq8 102 6e-17 seq161 93.3 3e-14 >seq8 Length=2239894 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | | ||| | |||||| || || || || || ||||| || || Sbjct 1730504 TGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAG 1730445 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | | ||||| | ||| || || || | |||| |||||| || ||| || Sbjct 1730444 AAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTG 1730385 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||||||||| || ||| ||||||| | ||||| || || ||| | Sbjct 1730384 GGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGA 1730325 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | |||| ||||| || || || ||||| |||||||| ||||||||||| Sbjct 1730324 CTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | | ||| | |||||| || || || || || || || || || Sbjct 1733799 TGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAG 1733740 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | | ||||| | ||| || || || | |||| |||||| || ||| || Sbjct 1733739 AAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTG 1733680 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||||||||| || ||| ||||||| | ||||| || || ||| | Sbjct 1733679 GGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGA 1733620 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | |||| ||||| || || || ||||| |||||||| ||||||||||| Sbjct 1733619 CTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 >seq161 Length=136094 Score = 93.3 bits (102), Expect = 3e-14 Identities = 109/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 15037 CCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCT 15095 |||||| | ||||||||||| |||||| |||||||||||||||||| ||| ||||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGC- 37998 Query 15096 TTTTACAATTTCTATAGTATCGCTAT-TTTCTACGTCTAAGGTAATGGTTTTACCTGTCA 15154 || ||| | || |||||||| | || ||| || || | || || || ||||| |||| Sbjct 37997 CTTGACATTCTCAATAGTATC-CGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCA 37939 Query 15155 GAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| Sbjct 37938 ATGTTTTCACGAAAATCTGCAT 37917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357386119784750