Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 6e-12 >seq8 Length=2239894 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | || | ||| | ||| || || || |||||||| || || Sbjct 1733797 CCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAA 1733738 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || || || ||||| || |||||| |||||||||||||| || Sbjct 1733737 AGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGG 1733678 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||||||| ||| || || | || | ||||| | |||||| Sbjct 1733677 ATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACT 1733618 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | | || | || ||||| ||||| |||||||| ||||| ||||| Sbjct 1733617 GCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || || || || ||||| || || || Sbjct 1707838 CCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAA 1707779 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||||||||| || |||||| |||||||||||||| || Sbjct 1707778 AGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGG 1707719 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCG-TACTCTCG 127063 ||||| || |||||| ||| || |||| | ||| ||| | || || | | || ||| Sbjct 1707718 ATGCCTTCTTTGTCCTGGATCTT-GGCTTTAACGTT-TTCAATCGTATCTGATGCT-TCG 1707662 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | || | ||| || || || | || || || || || ||||| Sbjct 1707661 ACTTCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475492775924000