Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 >seq8 Length=2239894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || ||||| ||||| |||||||| || |||||||| || || || | | ||| | Sbjct 1733779 ACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCA--GAAAGTGTGCGCCCATCTT 1733722 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | ||| ||||| || | |||| || ||||| || || || |||||||| || || | Sbjct 1733721 CAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCT 1733662 Query 45250 GAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 | || || ||| | | || |||| ||||| || | |||||| | | |||| || Sbjct 1733661 GGATCTTGGCTTTTA-CACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTC 1733603 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||| ||||||||||| Sbjct 1733602 TTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||||||| ||||| || || ||||| ||||||||||||||||||||| ||| | | Sbjct 1706266 ATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTTGCTTTCACATTT 1706207 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | || || || | ||| ||||| | || | |||||| || |||| ||||| ||| Sbjct 1706206 TCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTTAACGTTTTCACA 1706147 Query 45330 AAAATTTGCAT 45340 || || ||||| Sbjct 1706146 AAGATCTGCAT 1706136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || ||||| ||||| |||||||| || || ||||| || || || | | ||| | Sbjct 1730484 ACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCA--GAAAGTGTGCGCCCATCTT 1730427 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | ||| ||||| || | |||| || ||||| || || || |||||||| || || | Sbjct 1730426 CAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCT 1730367 Query 45250 GAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 | || || ||| | | || |||| ||||| || | |||||| | | |||| || Sbjct 1730366 GGATCTTGGCTTTTA-CACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTC 1730308 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||| ||||||||||| Sbjct 1730307 TTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 45201 CCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 45260 |||||| | || | || ||||| |||||||| || ||||||||||| ||||| || Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 45261 TTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 || | ||| | || || || | |||||||| | || | |||||| || || ||| Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 45321 GTTTTTACAAAAATTTGCAT 45340 ||||| |||||||||||||| Sbjct 1707274 GTTTTGACAAAAATTTGCAT 1707255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451995572446000