Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8 127 5e-24 >seq8 Length=2239894 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| ||||| || |||||||| ||||| || | ||| ||||||| | || Sbjct 1707832 CGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTG 1707773 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| ||||| || ||||| ||||||||||| || || || ||| Sbjct 1707772 CGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCT 1707713 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| || ||| ||| | || |||| || ||| || || || Sbjct 1707712 TCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAA 1707653 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || | || ||||| || ||||| Sbjct 1707652 GTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTG 1707615 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || || ||||| ||||| || | ||| ||||||| | || Sbjct 1730496 CGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTG 1730437 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || |||||||| || ||||| ||||||||||| || || || ||| Sbjct 1730436 CGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCT 1730377 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | ||||| | | ||| || | ||| Sbjct 1730376 TCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAAC 1730317 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || ||||| || |||||||| Sbjct 1730316 GTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTG 1730279 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || || ||||| ||||| || | || ||||||| | || Sbjct 1733791 CGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTG 1733732 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || |||||||| || ||||| ||||||||||| || || || ||| Sbjct 1733731 CGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCT 1733672 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | ||||| | | ||| || | ||| Sbjct 1733671 TCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAAC 1733612 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || ||||| || |||||||| Sbjct 1733611 GTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTG 1733574 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || ||||| || ||||||||||| ||||| || |||||| ||||||||||| | Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609 || || ||| | || |||| | ||| || ||||| || ||||| ||||| || ||| Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 199610 GTTTTCACAAAAATTTG 199626 ||||| ||||||||||| Sbjct 1707274 GTTTTGACAAAAATTTG 1707258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178901208340450