Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 1e-12 >seq8 Length=2239894 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548 || ||| || || | ||| || || | ||| | || ||| || || |||||||| || Sbjct 1733801 ATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTC 1733742 Query 39549 GGCCAAAACGCGTTCATCGTCCAATTG-TTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607 | | ||| |||| || | ||| |||||||| ||| || | |||||||||||| | Sbjct 1733741 AGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGC-AAAGATCAGACGCTGCTGATCGG 1733683 Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTT 39667 || | |||||| ||||| || || ||| | || ||| |||||| | | || Sbjct 1733682 GTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTT 1733623 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | || |||||||| || ||||| | ||||||||||| || ||||| Sbjct 1733622 CGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548 || ||| || || | ||| || || | ||| | || ||| || || || ||||| || Sbjct 1730506 ATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTC 1730447 Query 39549 GGCCAAAACGCGTTCATCGTCCAATTG-TTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607 | | ||| |||| || | ||| |||||||| ||| || | |||||||||||| | Sbjct 1730446 AGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGC-AAAGATCAGACGCTGCTGATCGG 1730388 Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTT 39667 || | |||||| ||||| || || ||| | || ||| |||||| | | || Sbjct 1730387 GTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTT 1730328 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | || |||||||| || ||||| | ||||||||||| || ||||| Sbjct 1730327 CGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363884684550