Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 118 1e-21 >seq8 Length=2239894 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || ||| | || || || || || || | || ||||| || | Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| |||||| || |||| |||||||| || || || |||| || Sbjct 1707672 GATACGATTGAAAACG-TTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCA 1707730 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||||| |||||||| || || | |||||| || ||||| || Sbjct 1707731 GCAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAA 1707790 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || |||||| |||| || ||| | || |||||| Sbjct 1707791 CATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGT 1707827 Score = 113 bits (124), Expect = 5e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| |||||||||||||| |||||||| || || || | | ||||| ||| | Sbjct 1730275 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1730334 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| || |||| ||||| || || || || |||| || Sbjct 1730335 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1730394 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||||| || || || || || | |||||| || ||||| || Sbjct 1730395 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1730454 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || |||||| ||||||| ||| | || || ||| Sbjct 1730455 CATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGT 1730491 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| |||||||||||||| |||||||| || || || | | ||||| ||| | Sbjct 1733570 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1733629 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| || |||| ||||| || || || || |||| || Sbjct 1733630 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1733689 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||||| || || || || || | |||||| || ||||| || Sbjct 1733690 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1733749 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| ||||||| ||| | || || ||| Sbjct 1733750 TATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGT 1733786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164359584000