Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 161 4e-34 seq161 111 6e-19 seq185 87.8 7e-12 >seq8 Length=2239894 Score = 161 bits (178), Expect = 4e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 |||||||| || || || ||||||||| | ||||||||||||| || ||| ||| | Sbjct 1579071 CCTGAAGAGATATCGTCGATGGTTCTTTCAAAAATGAAAGAAATTGCTGAAGCGTATTTG 1579130 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| || || | |||| ||||| || || || |||||||||| || |||||||| Sbjct 1579131 GGTAAACCTGTGAAAAATGCTGTAATAACAGTGCCAGCTTATTTCACCGACGCACAACGT 1579190 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || ||||| |||||||| || |||||||||| | ||||| ||||||| || |||||| Sbjct 1579191 CAGGCAACAAAAGATGCTGGGACTATTGCTGGTCTTAATGTAGTTCGAATCATAAATGAA 1579250 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| ||||||||| | || |||||| Sbjct 1579251 CCTACCGCAGCTGCTATTGCTTATGGA 1579277 Score = 109 bits (120), Expect = 2e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 451475 GaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534 |||||||||||||| ||||||||| ||||||| |||||| |||| || || | || Sbjct 1579382 GAAAAAAATATTTTGGTATTTGATCTTGGTGGTGGAACTTTTGATGTATCAGTGTTGACA 1579441 Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 || || |||| ||||||||||| ||| || |||||||| || ||||| || |||||| Sbjct 1579442 ATCGATAATGGAGTATTTGAAGTTTTGGCGACAAATGGTGACACACATCTTGGTGGTGAA 1579501 Query 451595 GATATTGA 451602 ||| |||| Sbjct 1579502 GATTTTGA 1579509 Score = 98.7 bits (108), Expect = 4e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| | ||||||||||| || || | || ||||| |||| Sbjct 1706136 ATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCATCG 1706195 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | ||| ||||||||||||||| ||||||||||| |||||||| Sbjct 1706196 GATACAATCGAAAATGTGAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAG 1706255 Query 391170 CAACGTTTAATTTT 391183 || || || ||||| Sbjct 1706256 CAGCGATTGATTTT 1706269 Score = 96.9 bits (106), Expect = 1e-14 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 452231 GAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAAC 452290 ||||| |||||| |||||||| |||||| | | | || | ||| | | || Sbjct 1580431 GAAGGTGAACGTCCAATGACAAAAGATAACCACATTTTGGGCAAGTTTGATTTAACAGGA 1580490 Query 452291 ATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAAT 452350 |||||||| || | || ||||||||||||| |||| | || |||||| ||| Sbjct 1580491 ATTCCTCCAGCTCCTCGAGGTGTTCCTCAAATTGAAGTTACTTTCGAAATTGATGTTAAT 1580550 Query 452351 GGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAAT 452409 ||||| || |||| | || | || ||| | |||| ||| |||| ||||| || || Sbjct 1580551 GGTATACTACATGTAACAGCTGAAGATAAAGGAACTGG-TAATAAGAATAAAATCACTAT 1580609 Query 452410 TACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGA 452469 ||| |||||| | ||| | |||||| |||||||||||| |||| | |||| || || Sbjct 1580610 TACCAATGATCATAACAGATTATCTCCTGAAGATATTGAACGAATGATTAATGATGCTGA 1580669 Query 452470 AAAATTC 452476 || ||| Sbjct 1580670 GAAGTTC 1580676 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| ||||| || || || ||||| | | || ||| | || Sbjct 1733570 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1733629 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| || || || || |||||||| || || || ||||| Sbjct 1733630 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1733689 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || || | || || |||||||||||||| | || | | || ||||| Sbjct 1733690 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1733749 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 |||| | ||||| | || ||||| Sbjct 1733750 TATTCAGAAGGAATCGACGCTTCA 1733773 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| ||||| || || || ||||| | | || ||| | || Sbjct 1730275 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1730334 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| || || || || |||||||| || || || ||||| Sbjct 1730335 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1730394 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || || | || || |||||||||||||| | || | | || ||||| Sbjct 1730395 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1730454 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 1730455 CATTCAGAAGGAATCGACGCTTCA 1730478 Score = 87.8 bits (96), Expect = 7e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| || ||||||||||| || || | || || ||| | || Sbjct 1707254 AATGCAAATTTTTGTCAAAACTCTTACTGGTAAAACGATAACATTGGAAGTCGAAGCGTC 1707313 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | |||| || ||||| ||||| ||||| || || || ||||| Sbjct 1707314 AGATACGATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCGCCGGATCA 1707373 Query 391169 ACAACGTTTAATTTTCTCAGG 391189 || ||| | |||||| |||| Sbjct 1707374 GCAGCGTCTTATTTTCGCAGG 1707394 Score = 87.8 bits (96), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | ||||| || || || ||| | || || ||| |||| Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| ||||| || || || || || ||||| || || || ||||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || ||||| ||||||||||| | || | | || ||||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCA 1707814 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| | || || ||||| || || ||||| || ||| | || Sbjct 1706478 ATGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCC 1706537 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || |||||| |||||||| || ||||| || || |||||| Sbjct 1706538 GATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAA 1706597 Query 391170 CAACGTTTAATTTTCTCAGG 391189 ||||| | ||||| |||| Sbjct 1706598 CAACGCCTTATTTTTGCAGG 1706617 >seq161 Length=136094 Score = 111 bits (122), Expect = 6e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| |||||| |||||||||| || || || ||||| |||||| |||| Sbjct 37916 AATGCAGATTTTCGTGAAAACATTGACTGGTAAGACAATAACACTTGAAGTTGAAGCATC 37975 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | | || ||| ||||| || |||||||||||||| || || || Sbjct 37976 GGATACTATTGAGAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCCGACCA 38035 Query 391169 ACAACGTTTAATTTTC 391184 || ||||| |||||| Sbjct 38036 GCAGCGTTTGATTTTC 38051 >seq185 Length=109727 Score = 87.8 bits (96), Expect = 7e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||||| || | || || || || ||||| |||||| |||| || ||||| || || ||| Sbjct 76238 GATGCTGTGGTGACCGTGCCGGCATATTTTAATGATTCACAGCGTCAAGCTACCAAGGAT 76179 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 ||||| || || ||||| ||||||||||| || || ||||| || ||||| || ||| Sbjct 76178 GCAGGGGCCATCGCGGGTTTGAATGTTCTTCGTATCATAAATGAGCCAACAGCCGCGGCT 76119 Query 451439 CTAGCATATGG 451449 | || || || Sbjct 76118 ATCGCTTACGG 76108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975684226245800