Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq8 132 4e-25 seq2 102 6e-16 seq185 87.8 1e-11 >seq8 Length=2239894 Score = 132 bits (146), Expect = 4e-25 Identities = 178/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 || ||| || ||||| | | ||||| || | ||| | | ||| ||| ||| ||| Sbjct 1578891 AAAAACCTTGAATGGTAAATGTTTCAAGTCAGCTTGTATAGTTTCATCACGAAACATTCT 1578832 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 |||||||||||||| ||||||||||| ||||| ||||||| | | ||||| || Sbjct 1578831 TCCAATTAATCGTTTCGCATCAAAAATTGTATTCTCTGGATTACTGGTTAGTTGATTCTT 1578772 Query 518563 GGCTGCATCTCCAATCAGATGTT---CTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 |||| ||| ||||| | | ||| | ||||| |||| |||||| || || || | Sbjct 1578771 TGCTGGATCACCAATTAAACGTTCACCAGTCTCCAGGAATGCAACATAGGAAGGTGTGAT 1578712 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||||| ||||||||||||||||| ||||| ||| ||||||| | | ||| ||||| Sbjct 1578711 ACGATTTCCTTGATCATTCGCAATGATTTCCACTCGTCCATTTTTGTAAATACCAACACA 1578652 Query 518680 ACTAAAA 518686 ||| ||| Sbjct 1578651 ACTGAAA 1578645 Score = 107 bits (118), Expect = 1e-17 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||| | ||||| |||| |||||| || || |||||||| || |||| | ||| Sbjct 1579288 TTCTTATCCAATCCATAAGCAATAGCAGCTGCGGTAGGTTCATTTATGATTCGAACTACA 1579229 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||||||| | || |||||||| || || || | ||||| ||| | ||||| Sbjct 1579228 TTAAGACCAGCAATAGTCCCAGCATCTTTTGTTGCCTGACGTTGTGCGTCGGTGAAATAA 1579169 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT--GCCGTTT 518342 || || || || || || |||| | || |||||| | ||| ||||| || ||| Sbjct 1579168 GCTGGCACTGTTATTACAGCATTTTTCACAGGTTTACCCAAATA--CGCTTCAGCAATTT 1579111 Query 518343 GTTTCATTTT 518352 ||||||||| Sbjct 1579110 CTTTCATTTT 1579101 Score = 91.5 bits (100), Expect = 1e-12 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAG---AGAATCTTCCGCGATTATTAGT 517218 ||| || ||||||||| ||||| |||||||| | ||||| ||| ||| || Sbjct 1580667 AGCATCATTAATCATTCGTTCAAT---ATCTTCAGGAGATAATCTGTTATGATCATTGGT 1580611 Query 517219 AATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACC 517278 |||||| || || || || ||| |||||| | || || |||| || ||||| Sbjct 1580610 AATAGTGATTTTATTCTTATTACCAGTTCCTTTATCTTCAGCTGTTACATGTAGTATACC 1580551 Query 517279 ATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGAT 517338 ||| |||| | || || || |||||||||||||| || |||| |||| || || || Sbjct 1580550 ATTAACATCAATTTCGAAAGTAACTTCAATTTGAGGAACACCTCGAGGAGCTGGAGGAAT 1580491 Query 517339 CCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTC 517398 ||| |||| ||| | |||| | | | |||||||| || | | |||||||| || Sbjct 1580490 TCCTGTTAAATCAAACTTGCCCAAAATGTGGTTATCTTTTGTCATTGGACGTTCACCTTC 1580431 Query 517399 GAAAA 517403 | ||| Sbjct 1580430 GTAAA 1580426 >seq2 Length=3890600 Score = 102 bits (112), Expect = 6e-16 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| ||||| | || || || |||||||| ||| |||| || | |||||||| | Sbjct 2299982 TGTACATTAATTGTAACTGAAGGGGATTCAGCCAAAGCATTAGCAGTTGCTGGTCTTTCT 2299923 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 |||||||||||||||||||||||| |||||| || ||||||| ||| | ||| | || Sbjct 2299922 ACTATTGGAAGAGATTATTATGGAGTATTCCCAATTCGAGGAAAGCTTATTAATACTCGG 2299863 Query 635561 GATGCTAG 635568 ||| |||| Sbjct 2299862 GAT-CTAG 2299856 >seq185 Length=109727 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| | ||| || || | ||| || || ||||| ||||| || || | | |||| Sbjct 76096 TTTTTATCCAAACCGTAAGCGATAGCCGCGGCTGTTGGCTCATTTATGATACGAAGAACA 76155 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || | ||| || || |||||||| || || ||||| | |||||||| ||||||||| Sbjct 76156 TTCAAACCCGCGATGGCCCCTGCATCCTTGGTAGCTTGACGCTGTGAATCATTAAAATAT 76215 Query 518285 GCAGGAACAGTAATAACGGCATC 518307 || || || || | || ||||| Sbjct 76216 GCCGGCACGGTCACCACAGCATC 76238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780755408553100