Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq185 140 4e-28 seq8 129 7e-25 seq51 82.4 1e-10 >seq185 Length=109727 Score = 140 bits (154), Expect = 4e-28 Identities = 187/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||| || || || | ||||| ||||| || || ||| | || || | | || Sbjct 75296 CCTCATCCGGATTGATACTCTTATTAAGTTCCTTGCCAGAGAAAAAGTCAGAAAGAAGTT 75355 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 |||| ||| || || || ||||| || || || | ||| || || | || || ||| | Sbjct 75356 TCTGAACTTTTGGTATACGCGTCGACCCTCCAACAAGAACAATGTCGTGCATTTGCGACT 75415 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 |||| ||||||| || ||||| | ||| || ||||| |||||| | |||||| || | Sbjct 75416 TATCCATCTTTGCATCACGAAGGGCTTTCTCAACAGGATCCATAGTTGAACGGAATAAAT 75475 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | ||||| || |||||||||||||| || || |||||||||||||| || ||| Sbjct 75476 CAGCGCACAGCTCTTCAAAACGTGCACGAGTGATATTTGTATAGAAATCAATCCCTTCGA 75535 Query 7296 ATAACGAATCAATTTCAATG 7315 | | ||||||||||| ||| Sbjct 75536 AGAGTGAATCAATTTCTATG 75555 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || ||||| || || || ||||| |||||| || ||||| || Sbjct 74649 TTCATCATCTGCTTTGTATTTTTCTGCCTCCTGAACCATACGTTCAATCTCATCTTTTGA 74708 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | | || |||||||| ||||||||||| || | ||| || | | ||||||| Sbjct 74709 GAGACGACCTTTATCATTTGTAATCGTAATTTTATTTTGTTTTCCGGTCGATTTATCTTG 74768 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| ||||||||| ||||| || ||||||| ||||| | || | ||| || || Sbjct 74769 TGCAGATACATTCAATATACCGTTCGCATCAATGTCGAAAGTGACTTCAATCTGCGGCAC 74828 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAAT 6784 ||| | || || | |||||||| | || |||||| Sbjct 74829 ACCACGAGGGGCCGGAGGAATACCTGACAATTCAAAT 74865 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || ||||| | |||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct 76096 TTTTTATCCAAACCGTAAGCGATAGCCGCGGCTGTTGGCTCATTTATGATACGAAGAACA 76155 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||| || || || | | ||||| || || ||||| || || ||||| ||||| || Sbjct 76156 TTCAAACCCGCGATGGCCCCTGCATCCTTGGTAGCTTGACGCTGTGAATCATTAAAATAT 76215 Query 7715 GCCGGGACCGTTACGACCGCGTCC 7738 ||||| || || || || || ||| Sbjct 76216 GCCGGCACGGTCACCACAGCATCC 76239 >seq8 Length=2239894 Score = 129 bits (142), Expect = 7e-25 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 |||||||| | || || || ||||| || || || |||||||| || || |||| ||| Sbjct 1579288 TTCTTATCCAATCCATAAGCAATAGCAGCTGCGGTAGGTTCATTTATGATTCGAACTACA 1579229 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || ||||||||||| | |||||||| || || || ||||| | ||| | || || Sbjct 1579228 -TTAAGACCAGCAATAGTCCCAGCATCTTTTGTTGCCTGACGTTGTGCGTCGGTGAAATA 1579170 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 || || || |||| || || | | || ||||| | ||||| ||| || || || Sbjct 1579169 AGCTGGCACTGTTATTACAGCATTTTTCACAGGTTTACCCAAATACGCTTCAGCAATTTC 1579110 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 ||||||||| | |||||||||||| || |||||||||| Sbjct 1579109 TTTCATTTTTGAAAGAACCATCGACGATATCTCTTCAG 1579072 Score = 86.0 bits (94), Expect = 8e-12 Identities = 171/251 (68%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 6585 ACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCAT 6644 |||| || ||||| | | ||| |||||| ||||| |||||||| | ||||| Sbjct 1580674 ACTTCTCAGCATCATTAATCATTCGTTCAATATCTTCAGGAGATAATCTGTTATGATCAT 1580615 Query 6645 TCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAA 6703 | ||||| || || || ||| ||| ||| | | ||||||||||| |||||| | Sbjct 1580614 TGGTAATAGTGATTTTATTCTTATT-ACCAGTTCCTTTATCTTCAGCTGTTACATGTAGT 1580556 Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 |||||||| |||||| ||||| | || | |||||| || ||| | || || | Sbjct 1580555 ATACCATTAACATCAATTTCGAAAGTAACTTCAATTTGAGGAACACCTCGAGGAGCTGGA 1580496 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 ||||| || ||||||||||| | || | | |||||| | | | | ||||||| Sbjct 1580495 GGAATTCCTGTTAAATCAAACTTGCCCAAAATGTGGTTATCTTTTGTCATTGGACGTTCA 1580436 Query 6824 CCTTCATAGAC 6834 ||||| || || Sbjct 1580435 CCTTCGTAAAC 1580425 >seq51 Length=402594 Score = 82.4 bits (90), Expect = 1e-10 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 105528 AGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAAT 105587 |||||| | || |||||||| || ||| | || || |||||||| | ||| |||| Sbjct 115770 AGGACACATCAGTGACCAATCACTATCACTGTTTACTCGGTTCATGAAAAGATCGGGAAC 115829 Query 105588 CCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAAT 105647 ||| | | ||||||| |||||||| | | || |||||| || ||| | | Sbjct 115830 CCATAAACCAAAAAAGAGATCTCGACAACGCTCCAATTCATCGCCGAAATTTTTTCTTAA 115889 Query 105648 TTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG 105700 || ||| | || | ||||||||| ||||||||||| ||||| | ||||| || Sbjct 115890 ATCTAGATATTCAAAAATATCGGCATGCCATGGTTCCAAATATATTGCAAAAG 115942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635122082134000