Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8 125 6e-24 seq161 93.3 3e-14 >seq8 Length=2239894 Score = 125 bits (138), Expect = 6e-24 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| ||||| ||||| ||||| || ||||| |||||||||||||||||||| Sbjct 1706279 CTTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTT 1706220 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||| ||| |||| | || || || | || ||||| | || | |||||| || || Sbjct 1706219 TGCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGT 1706160 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||| ||||| ||||| |||||||| Sbjct 1706159 TAACGTTTTCACAAAGATCTGCAT 1706136 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || ||||||||| || | || |||||||| || || || || ||||||||||| ||||| Sbjct 1706621 CTCACCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTATTTT 1706562 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| |||| | || || || | |||||| ||||| || | |||||||| || Sbjct 1706561 TGCCTTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGCCCGT 1706502 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||||||||| || || |||||||| Sbjct 1706501 TAAAGTTTTCACGAAAATCTGCAT 1706478 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||| || ||||| || || || || || || | | || | | Sbjct 1707827 ACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCC 1707768 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | || || || ||||| |||| |||||| |||||||| || ||||||||||| Sbjct 1707767 ATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTT 1707708 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || ||| || |||| | || || || | ||| ||||| | ||| | Sbjct 1707707 GTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTAT 1707648 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || || ||||| || || || ||||| ||||| Sbjct 1707647 CGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 101329 ACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTG 101388 |||||| || || | |||||| ||||| ||||| || ||||||||||| ||||| || Sbjct 1707395 ACCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGC 1707336 Query 101389 TTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAA 101448 || ||| |||| | || || |||| ||| ||||| | || | |||||| || || | Sbjct 1707335 CTTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAG 1707276 Query 101449 AGTTTTTACAAATATCTGCAT 101469 |||||| ||||| || ||||| Sbjct 1707275 AGTTTTGACAAAAATTTGCAT 1707255 >seq161 Length=136094 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 101329 ACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTG 101388 ||| || || ||||||||||| || ||||| ||||| ||||| || || ||||| ||| Sbjct 38057 ACCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGC 37998 Query 101389 TTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAA 101448 || ||| | || | ||| || || | ||| |||||||| || | || || || || || Sbjct 37997 CTTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAA 37938 Query 101449 AGTTTTTACAAATATCTGCAT 101469 ||||| || || |||||||| Sbjct 37937 TGTTTTCACGAAAATCTGCAT 37917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396271879981950