Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq8 122 6e-22 seq185 100 2e-15 seq161 93.3 3e-13 seq142 87.8 1e-11 >seq8 Length=2239894 Score = 122 bits (134), Expect = 6e-22 Identities = 171/239 (72%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||||||| | | | || |||||||| ||| | || | ||| || | ||| Sbjct 1580431 GAAGGTGAACGTCCAATGACAAAAGATAACCACATTTTGGGCAAGTTTGATTTAACAGGA 1580490 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 |||||||| ||||| |||| ||||||||||||||||||||||| || ||||||| ||| Sbjct 1580491 ATTCCTCCAGCTCCTCGAGGTGTTCCTCAAATTGAAGTTACTTTCGAAATTGATGTTAAT 1580550 Query 476153 GGTATTCTTAATGTTACTGCTTGTGATAA---ATCTAGTAACAAGAGTAAAAATATAACT 476209 ||||| || |||| || ||| ||||| | || |||| |||| |||| || ||| Sbjct 1580551 GGTATACTACATGTAACAGCTGAAGATAAAGGAACTGGTAATAAGAATAAA---ATCACT 1580607 Query 476210 ATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGC 476268 ||||| || ||| | ||||| || ||| | ||| |||| ||| || |||| || Sbjct 1580608 ATTACCAATGATCATAACAGATTATCTCCTGAAGATATTGAACGAATGATTAATGATGC 1580666 Score = 120 bits (132), Expect = 2e-21 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || ||| || || |||||| |||| || || Sbjct 1733792 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGT 1733733 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||||||||| ||||| || ||||| || ||||| || || || || Sbjct 1733732 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1733673 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| || ||||| ||| ||| || || || |||| | | | | | Sbjct 1733672 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1733613 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || ||||||||||| Sbjct 1733612 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTG 1733574 Score = 118 bits (130), Expect = 7e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 474657 CACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATC 474716 |||| ||| | || || || |||||| | | ||||||||| ||| || | ||| Sbjct 1579069 CACCTGAAGAGATATCGTCGATGGTTCTTTCAAAAATGAAAGAAATTGCTGAAGCGTATT 1579128 Query 474717 TTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAAC 474776 | || || || | |||| ||||| || || ||||| ||||| | || | |||| Sbjct 1579129 TGGGTAAACCTGTGAAAAATGCTGTAATAACAGTGCCAGCTTATTTCACCGACGCACAAC 1579188 Query 474777 GTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATG 474836 |||| ||||| |||||||| || | ||||| ||||||||||| | || || || |||| Sbjct 1579189 GTCAGGCAACAAAAGATGCTGGGACTATTGCTGGTCTTAATGTAGTTCGAATCATAAATG 1579248 Query 474837 AACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || ||||| || |||||||||| | |||||||| Sbjct 1579249 AACCTACCGCAGCTGCTATTGCTTATGGATTGGATAAGAA 1579288 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || ||| || || ||||| |||| || || Sbjct 1730497 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGT 1730438 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||||||||| ||||| || ||||| || ||||| || || || || Sbjct 1730437 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1730378 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| || ||||| ||| ||| || || || |||| | | | | | Sbjct 1730377 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1730318 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || ||||||||||| Sbjct 1730317 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTG 1730279 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || ||| || || ||||| |||| || || Sbjct 1707833 ACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGT 1707774 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| || ||||| ||||| || ||||| || ||||| || || || || Sbjct 1707773 GCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1707714 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||| ||||| || ||||| ||| || |||||| ||||| | || | | ||| | Sbjct 1707713 TTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGA-CTTCTA 1707655 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || | ||||| ||||| ||||| Sbjct 1707654 AAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTG 1707615 Score = 96.9 bits (106), Expect = 2e-14 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 290842 AGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATC 290901 |||||| || ||||||||||| |||| | ||||| |||||| ||||| | | | ||| Sbjct 1579262 AGCTGCGGTAGGTTCATTTATGATTCGAACTACATTAAGACCAGCAATAGTCCCAGCATC 1579203 Query 290902 TAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttc 290961 | |||||||| ||||| || || | |||||||| || ||||| || ||||| |||| Sbjct 1579202 TTTTGTTGCCTGACGTTGTGCGTCGGTGAAATAAGCTGGCACTGTTATTACAGCATTTTT 1579143 Query 290962 cactttctttttcaaataattttctgccatttgttttattt 291002 ||| || |||||| ||| || |||| ||| |||| Sbjct 1579142 CACAGGTTTACCCAAATACGCTTCAGCAATTTCTTTCATTT 1579102 Score = 95.1 bits (104), Expect = 8e-14 Identities = 167/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 474355 TTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGG 474414 || ||||||||| | | ||| ||||||| ||| ||||| ||||| ||||| ||||| Sbjct 1578645 TTTCAGTTGTGTTGGTATTTACAAAAATGGACGAGTGGAAATCATTGCGAATGATCAAGG 1578704 Query 474415 TAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTG---AACATCTTATTGGAGA 474471 ||| | | ||||| || |||||| | || || |||| ||| | | ||||| || Sbjct 1578705 AAATCGTATCACACCTTCCTATGTTGCATTCCTGGAGACTGGTGAACGTTTAATTGGTGA 1578764 Query 474472 TGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATT 474531 | | || || ||||| | |||||| | ||||| ||||||||||| ||| |||| Sbjct 1578765 TCCAGCAAAGAATCAACTAACCAGTAATCCAGAGAATACAATTTTTGATGCGAAACGATT 1578824 Query 474532 GATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAA 474591 ||||| | | ||| |||| ||| | ||| |||| || |||| || || || Sbjct 1578825 AATTGGAAGAATGTTTCGTGATGAAACTATACAAGCTGACTTGAAACATTTACCATTCAA 1578884 Query 474592 GGT 474594 ||| Sbjct 1578885 GGT 1578887 Score = 89.7 bits (98), Expect = 3e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| ||||| ||||| || || || || ||||| | ||||| ||| | Sbjct 1729930 CCAGCAAAAATAAGGCGTTGCTGATCTGGTGGTATACCCTCCTTATACTGAATTTTTGCT 1729871 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || ||| ||||||||||| | | | | || | || || ||||||||||| || Sbjct 1729870 TTCACATTCTCAATAGTATCCGATTCTTCAACCTCCAATGTTATCGTTTTACCGGTAAGC 1729811 Query 480753 GTCTTAACGAAAATTTG 480769 || || ||||||||||| Sbjct 1729810 GTTTTTACGAAAATTTG 1729794 >seq185 Length=109727 Score = 100 bits (110), Expect = 2e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 ||||| || | || || || ||||||||||||||||| || |||||||| || || ||| Sbjct 76238 GATGCTGTGGTGACCGTGCCGGCATATTTTAATGATTCACAGCGTCAAGCTACCAAGGAT 76179 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || || || || ||| | |||||| | ||||| || ||||| |||||||| || || Sbjct 76178 GCAGGGGCCATCGCGGGTTTGAATGTTCTTCGTATCATAAATGAGCCAACAGCCGCGGCT 76119 Query 474854 CTTGCTTATGGTCTTGATAAGAA 474876 | ||||| ||| | ||||| || Sbjct 76118 ATCGCTTACGGTTTGGATAAAAA 76096 >seq161 Length=136094 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 ||||| ||||| | ||| || || || || ||||||||||||||||| ||||||||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 |||||| ||||||||||| | || | || |||||| || || || ||||| || | Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAA-CTTCAAGTGTTATTGTCTTACCAGTCAA 37938 Query 480752 AGTCTTAACGAAAATTTG 480769 || || |||||||| || Sbjct 37937 TGTTTTCACGAAAATCTG 37920 >seq142 Length=155666 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 ||| |||||||| | || ||||| || ||||||||||| || |||||||| | ||||| Sbjct 114134 AATAGATCAAACGCGTGGCTGGTTCTACACTTTATTAGTGCTGTCTACAGCACTTTTTAA 114193 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 |||||| | ||||||||| | || | || ||||| || |||| ||| || Sbjct 114194 TAAACCACCTTTTAAAAATCTTGTTTGCAACGGCCTTGTTCTTGCTTCTGACGGAAGTAA 114253 Query 297561 AATGTCAAAAAGTAAAGGTAATTATCCTGATCC 297593 |||||| ||||| || ||||| ||||| || Sbjct 114254 AATGTCTAAAAGGAAGAAGAATTACCCTGACCC 114286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268121291949800