Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq8 176 6e-39 seq185 143 4e-29 seq161 102 1e-16 >seq8 Length=2239894 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || ||||| || | ||||| || || || || | || || || | ||| Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || ||| | ||||||||||| || || || |||||||| |||||||||||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || ||||||||||||||||| || || || |||| || ||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| ||||| || ||||| || |||||||| | ||||| ||||| Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGTCTTCGTGGTGG 1707838 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| || || || || || || || | | || || | || Sbjct 1730276 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1730335 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||||||| || | | ||||||||||| || || ||||||||||| |||||||||||| Sbjct 1730336 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1730395 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || || ||||||||||| || || || |||| || ||| Sbjct 1730396 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAC 1730455 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| ||||| || || || || |||||||| | ||||| ||||| Sbjct 1730456 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGG 1730502 Score = 152 bits (168), Expect = 7e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| || || || || || || || | | || || | || Sbjct 1733571 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1733630 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||||||| || | | ||||||||||| || || ||||||||||| |||||||||||| Sbjct 1733631 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1733690 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || || ||||||||||| || || || |||| || || Sbjct 1733691 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAT 1733750 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| ||||| || || || || |||||||| | ||||| ||||| Sbjct 1733751 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGG 1733797 Score = 138 bits (152), Expect = 1e-27 Identities = 199/277 (72%), Gaps = 14/277 (5%) Strand=Plus/Plus Query 195586 GCCTATGATTAATGTTGAATT---TCACGGTGAGAAGAAACA-----ATTTGCTCCC--- 195634 ||| | ||| || ||||| || |||| ||| ||||||| | | ||| || | Sbjct 1579013 GCCCAAGATCAAAGTTGATTTATCTCACAGTGGGAAGAAAGAGGAAAAATTGTTCACACC 1579072 Query 195635 -GAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGG 195693 ||||| || ||||| ||||| | || ||||| || | ||| ||| | | |||| Sbjct 1579073 TGAAGAGATATCGTCGATGGTTCTTTCAAAAATGAAAGAAATTGCTGAAGCGTATTTGGG 1579132 Query 195694 TAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACA 195753 |||| |||||||| |||| || | || || || ||||| |||| || ||||||| || Sbjct 1579133 TAAACCTGTGAAAAATGCTGTAATAACAGTGCCAGCTTATTTCACCGACGCACAACGTCA 1579192 Query 195754 GGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAAC 195812 ||| ||||| || |||| ||||||| ||||| || ||| || |||| || ||||||| Sbjct 1579193 GGCAACAAAAGATGCTGGGACTATTGCTGGTCTTAA-TGTAGTTCGAATCATAAATGAAC 1579251 Query 195813 CAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 | || || ||||| ||||||||||| |||| ||||| Sbjct 1579252 CTACCGCAGCTGCTATTGCTTATGGATTGGATAAGAA 1579288 Score = 138 bits (152), Expect = 1e-27 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 |||||||| |||||||||||||| | ||||| ||||| || || | || |||||| | Sbjct 1706133 AGTATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCA 1706192 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || || |||||||| || | ||||| || ||||||||||| ||||| |||||||| ||| Sbjct 1706193 TCGGATACAATCGAAAATGTGAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 1706252 Query 171979 CAGCAACGACTTATTTTTGCTGGTAA 172004 ||||| ||| | |||||||| ||||| Sbjct 1706253 CAGCAGCGATTGATTTTTGCGGGTAA 1706278 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| |||||||| ||||| || || | || || || ||||| Sbjct 1707255 ATGCAAATTTTTGTCAAAACTCTTACTGGTAAAACGATAACATTGGAAGTCGAAGCGTCA 1707314 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || ||||||||||| ||||| ||||| || || || |||||| Sbjct 1707315 GATACGATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCGCCGGATCAG 1707374 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || |||||||| || ||| Sbjct 1707375 CAGCGTCTTATTTTCGCAGGT 1707395 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| ||||| || ||||| || || | |||||||| || Sbjct 1729791 ATGCAAATTTTCGTAAAAACGCTTACCGGTAAAACGATAACATTGGAGGTTGAAGAATCG 1729850 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | ||||| || ||||| ||||||| || || ||||| |||||| Sbjct 1729851 GATACTATTGAGAATGTGAAAGCAAAAATTCAGTATAAGGAGGGTATACCACCAGATCAG 1729910 Query 171982 CAACGACTTATTTTTGCTGGT 172002 ||||| ||||||||||||||| Sbjct 1729911 CAACGCCTTATTTTTGCTGGT 1729931 Score = 105 bits (116), Expect = 9e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || || |||||||| | || || ||||| || || || ||||| || | | Sbjct 1706476 GTATGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCT 1706535 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || |||||||| || | || || || || |||||||| || || || ||||| |||| Sbjct 1706536 CCGATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATC 1706595 Query 171980 AGCAACGACTTATTTTTGCTGGT 172002 | ||||| ||||||||||| ||| Sbjct 1706596 AACAACGCCTTATTTTTGCAGGT 1706618 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||||||||| ||||| || || || || || || || || || |||| Sbjct 1706905 ATGCAAATTTTTGTGAAAACGCTTACAGGCAAGACGATAACGCTTGAAGTAGAAGCGTCG 1706964 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || || |||||||||||||| || ||||| || || Sbjct 1706965 GATACGATTGAGAATGTTAAGGCAAAAATACAAGATAAGGAAGGTATACCACCGGACCAA 1707024 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || || || ||||||||| Sbjct 1707025 CAGCGCCTAATATTTGCTGGT 1707045 Score = 86.0 bits (94), Expect = 8e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 ||||| ||| | |||||||| | ||||| ||||| || | ||||| || || | || Sbjct 1728976 TATGCGAATTTGCGTGAAAACGTTAACTGGTAAAACAATGATACTCGAAGTGGAAGCTTC 1729035 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || ||||| || || || || | || || ||||| || | || || ||| |||| Sbjct 1729036 CGATACAATTGAGAATATTAAGGGGAAAATACAAGAAAAAGTGGGAATACCAAAATATCA 1729095 Query 171981 GCAACGACTTATTTTTGCTGGTAAA 172005 |||||||||||||||||| |||||| Sbjct 1729096 GCAACGACTTATTTTTGCCGGTAAA 1729120 >seq185 Length=109727 Score = 143 bits (158), Expect = 4e-29 Identities = 184/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 || |||||||| | || || || ||||| |||||||||| ||| || |||||||||||| Sbjct 75551 GAAATTGATTCACTCTTCGAAGGGATTGATTTCTATACAAATATCACTCGTGCACGTTTT 75492 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 |||||| | | ||||||| || | |||||| |||||||| ||| |||||| Sbjct 75491 GAAGAGCTGTGCGCTGATTTATTCCGTTCAACTATGGATCCTGTTGAGAAAGCCCTTCGT 75432 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 || ||||||||||||||||| | | | || ||||| ||||| ||||| || || ||| Sbjct 75431 GATGCAAAGATGGATAAGTCGCAAATGCACGACATTGTTCTTGTTGGAGGGTCGACGCGT 75372 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 || || || |||| | | |||||| ||| ||| | || || | || || | Sbjct 75371 ATACCAAAAGTTCAGAAACTTCTTTCTGACTTTTTCTCTGGCAAGGAACTTAATAAGAGT 75312 Query 196373 ATCAACCCGGATGA 196386 ||||| |||||||| Sbjct 75311 ATCAATCCGGATGA 75298 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA-TAATAA 196446 ||||| || |||||||| || ||||| || |||||| | || || | |||| | || Sbjct 75226 GCAGTAGCATATGGTGCCGCGGTTCAAGCAGCTATTTTGTCCGGAG---ACAAATCGGAA 75170 Query 196447 C--GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCG 196504 || || ||| | || || | |||||||| || | || || ||| |||| || || Sbjct 75169 GCAGTACAGGATTTGCTTCTGTTGGATGTTGCCCCACTTTCGCTCGGTATTGAGACTGCA 75110 Query 196505 GGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAA 196564 ||||| ||||||||| | ||| | | || || || ||||| || || | | || Sbjct 75109 GGTGGAGTTATGACTGCGTTAATTAAGCGTAATACTACAATTCCCACGAAAACAGCGCAG 75050 Query 196565 GTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 ||| | ||||||||||| || ||||| |||||| ||||| ||| Sbjct 75049 ACGTTTACTACGTATTCCGACAACCAACCTGGTGTTTTGATTCAGGTA 75002 >seq161 Length=136094 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || |||||||| | ||||| || || || || || || ||||| | || Sbjct 37917 ATGCAGATTTTCGTGAAAACATTGACTGGTAAGACAATAACACTTGAAGTTGAAGCATCG 37976 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || |||| || |||||||| || |||||||| ||||||||||| ||| Sbjct 37977 GATACTATTGAGAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCCGACCAG 38036 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || || | ||||| |||||| Sbjct 38037 CAGCGTTTGATTTTCGCTGGT 38057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657851298572000