Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq8 136 7e-27 >seq8 Length=2239894 Score = 136 bits (150), Expect = 7e-27 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277 || || |||||||| |||| ||| |||||||| || ||||||||||||||||| ||||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337 | ||| | |||| || ||||| || | ||||||||||| ||||| |||||||| ||| Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 193338 AGCGTTTTTACAAATATTTGCAT 193360 | |||||| ||||| || ||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || ||||| |||| | |||||| || || ||||| ||||| |||||||||||||| | Sbjct 1707044 CCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGCC 1706985 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 || | ||| ||| ||||| || | || ||||| || ||||| || || ||||| ||| Sbjct 1706984 TTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAGC 1706925 Query 193341 GTTTTTACAAATATTTGCATT 193361 ||||| ||||| ||||||||| Sbjct 1706924 GTTTTCACAAAAATTTGCATT 1706904 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| |||||||| || | ||| | ||| || | |||||||| ||||| || | | Sbjct 1707794 AATGTTATAGTCAGAAAGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACG 1707735 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||| || || || |||||||| || || || |||| ||| | ||| ||| || Sbjct 1707734 CTGCTGATCGGGTGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGT 1707675 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | || ||||||| |||||| || || || |||| ||| || || |||||||| Sbjct 1707674 ATCTGATGCTTCGACTTCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTG 1707615 Query 193358 CAT 193360 ||| Sbjct 1707614 CAT 1707612 Score = 100 bits (110), Expect = 5e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || |||||||| | | |||||||| || |||||||| ||||||||||||||||| | Sbjct 1706617 CCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTATTTTTGCC 1706558 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 || | |||| || |||||||| | || || || || ||||| ||||| || |||| Sbjct 1706557 TTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGCCCGTTAAA 1706498 Query 193341 GTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| Sbjct 1706497 GTTTTCACGAAAATCTGCAT 1706478 Score = 96.9 bits (106), Expect = 6e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || || ||||| | | ||| ||||| || || || ||||||||||| || || |||| Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 || | |||| ||| ||||| || | || ||||| | ||||| |||||||| || || Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 193341 GTTTTTACAAATATTTGCATT 193361 ||||| ||||| ||||||||| Sbjct 1707274 GTTTTGACAAAAATTTGCATT 1707254 Score = 93.3 bits (102), Expect = 8e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 193213 ATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTA 193272 ||| ||| ||||||||||| | || || |||| |||||||| |||| ||||||| Sbjct 1729124 ATTATTTACCGGCAAAAATAAGTCGTTGCTGATATTTTGGTATTCCCACTTTTTCTTGTA 1729065 Query 193273 TTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTAC 193332 |||| || ||||| ||| |||||||||| || ||||| || | || ||||||| Sbjct 1729064 TTTTCCCCTTAATATTCTCAATTGTATCGGAAGCTTCCACTTCGAGTATCATTGTTTTAC 1729005 Query 193333 CTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | |||| |||||| || | ||| |||| || Sbjct 1729004 CAGTTAACGTTTTCACGCAAATTCGCATATT 1728974 Score = 93.3 bits (102), Expect = 8e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || |||||||| | | || ||||| || ||||| || || |||| || ||||| | | Sbjct 1729930 CCAGCAAAAATAAGGCGTTGCTGATCTGGTGGTATACCCTCCTTATACTGAATTTTTGCT 1729871 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 || | ||| ||||||||| || ||||| || | ||||| |||||||| || ||| Sbjct 1729870 TTCACATTCTCAATAGTATCCGATTCTTCAACCTCCAATGTTATCGTTTTACCGGTAAGC 1729811 Query 193341 GTTTTTACAAATATTTGCATT 193361 |||||||| || ||||||||| Sbjct 1729810 GTTTTTACGAAAATTTGCATT 1729790 Score = 93.3 bits (102), Expect = 8e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | || || |||||||||||| || | || | | Sbjct 1733785 CGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCA 1733726 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || | | ||| ||||| || || || ||||| || Sbjct 1733725 TCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTG 1733666 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| ||||| | | || || || || | || ||| ||| || || Sbjct 1733665 TCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATT 1733606 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || ||||||||||| || ||||||||| Sbjct 1733605 GTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | || || ||| |||||||| || | || | | Sbjct 1730490 CGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCA 1730431 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || | | ||| ||||| || || || ||||| || Sbjct 1730430 TCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTG 1730371 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| ||||| | | || || || || | || ||| ||| || || Sbjct 1730370 TCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATT 1730311 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || ||||||||||| || ||||||||| Sbjct 1730310 GTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899639218332000