Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq8 123 5e-23 >seq8 Length=2239894 Score = 123 bits (136), Expect = 5e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||| |||||||| |||| ||| || |||||||| ||||||||||||||||| ||||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 ||| ||||| || ||||| || | || ||||||| || || |||||||||||| Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 172047 AATGTTTTAATGAATATCTGCAT 172069 || ||||| | || |||||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 104 bits (114), Expect = 4e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 ||||||||| |||| | ||||||||| |||||||| ||||| |||||||||||||| Sbjct 1707045 ACCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGC 1706986 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 || ||||| || ||||| |||| ||||||||| || || || || || || || | Sbjct 1706985 CTTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAG 1706926 Query 172049 TGTTTTAATGAATATCTGCATT 172070 ||||| | || || |||||| Sbjct 1706925 CGTTTTCACAAAAATTTGCATT 1706904 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 ||| |||||||| | | ||||| || ||||||||||| ||||||||||||||||| Sbjct 1706618 ACCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTATTTTTGC 1706559 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 || ||||| || ||||| || | ||| || || || || || ||||| || ||||| Sbjct 1706558 CTTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGCCCGTTAA 1706499 Query 172049 TGTTTTAATGAATATCTGCAT 172069 ||||| | ||| |||||||| Sbjct 1706498 AGTTTTCACGAAAATCTGCAT 1706478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905120725830000