Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 141 8e-29 >seq8 Length=2239894 Score = 141 bits (156), Expect = 8e-29 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | |||||||| || || || || |||||| | | ||| |||||| | Sbjct 1730276 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1730335 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | |||||| |||||||| ||||| ||||| || || |||||||| Sbjct 1730336 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1730395 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || || || || ||| | | | | || || |||||| Sbjct 1730396 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAC 1730455 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| ||||||||||| || || |||| Sbjct 1730456 ATTCAGAAGGAATCGACGCTTCATCTTG 1730483 Score = 138 bits (152), Expect = 1e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | |||||||| || || || || |||||| | | ||| |||||| | Sbjct 1733571 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1733630 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | |||||| |||||||| ||||| ||||| || || |||||||| Sbjct 1733631 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1733690 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || || || || ||| | | | | || || ||||| Sbjct 1733691 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAT 1733750 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| ||||||||||| || || |||| Sbjct 1733751 ATTCAGAAGGAATCGACGCTTCATCTTG 1733778 Score = 131 bits (144), Expect = 2e-25 Identities = 155/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || ||| |||| || || || || || | ||||| ||||| | Sbjct 1707611 GATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATC 1707670 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || ||| |||||||| ||||||||||| || || |||||||| Sbjct 1707671 AGATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCA 1707730 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||||||||| || |||||||| || ||| | | | | || || ||||| Sbjct 1707731 GCAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAA 1707790 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||| ||||||||||| || || |||| Sbjct 1707791 CATTCAGAAGGAATCGACTCTTCATCTTG 1707819 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | |||||| |||| |||||||| || ||| | ||||| || || | Sbjct 1706136 ATGCAGATCTTTGTGAAAACGTTAACTGGTAAAACGATAACGTTAGAAGTTGAGGCATCG 1706195 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| ||| || ||||| ||||||||||| || || ||||| Sbjct 1706196 GATACAATCGAAAATGTGAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAG 1706255 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 || || ||||| ||||| || || Sbjct 1706256 CAGCGATTGATTTTTGCGGGTAA 1706278 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||| || ||||| || ||||| || || |||||| || Sbjct 1706478 ATGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCC 1706537 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || ||| || ||||| ||||| |||||||| || |||||| Sbjct 1706538 GATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAA 1706597 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||| | || ||||| || Sbjct 1706598 CAACGCCTTATTTTTGCAGG 1706617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449890007978000