Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq8 100 4e-16 >seq8 Length=2239894 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| ||||| || |||||||| || |||| || ||| || Sbjct 1706479 TGCAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCCG 1706538 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || ||||||||| |||||| || || ||||| ||||||| Sbjct 1706539 ATACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAAC 1706598 Query 146152 AAAGACTCATTTTTGCAGGT 146171 || | || |||||||||||| Sbjct 1706599 AACGCCTTATTTTTGCAGGT 1706618 Score = 100 bits (110), Expect = 4e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||||||| | || || ||||| || || || || ||| | || || ||| ||| | Sbjct 1707613 TGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA- 1707671 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| |||| || ||| || || || ||||||||||| ||||||||||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || || ||||| || ||||| | || ||| | ||| | | || ||||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 146211 ATACAAAAAGAATCGACTATCCAT 146234 || || || ||||||||| | ||| Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCAT 1707815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786153133442000