Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq8 120 2e-22 >seq8 Length=2239894 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | |||||| || ||||| || ||||||||||| || | || ||||| Sbjct 1707827 ACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCC 1707768 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | |||| | |||||||| || || || || ||||| Sbjct 1707767 ATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTT 1707708 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| || |||| | || || || ||| ||||| | |||||| Sbjct 1707707 GTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTAT 1707648 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || ||||| ||||| Sbjct 1707647 CGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 107 bits (118), Expect = 1e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||||||| ||||| || ||||||||||| || | || ||||| Sbjct 1730491 ACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCC 1730432 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || || ||| | |||| | |||||||| || || || || || || Sbjct 1730431 ATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTT 1730372 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| ||| | |||| |||||||| ||| ||| | | || || Sbjct 1730371 GTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAAT 1730312 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || | ||||| || || || |||||| Sbjct 1730311 TGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 |||||| |||| | | || || ||||| || ||||| || || ||||||| |||| Sbjct 1707044 CCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGCC 1706985 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || ||| | || | || || || |||||||||||| ||||| || ||||| || | Sbjct 1706984 TTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAGC 1706925 Query 29767 GTTTTAACAAATATCTGCATT 29787 ||||| ||||| || |||||| Sbjct 1706924 GTTTTCACAAAAATTTGCATT 1706904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385212861940350