Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq8 174 3e-38 seq161 96.9 7e-15 >seq8 Length=2239894 Score = 174 bits (192), Expect = 3e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||||||| | || ||||| ||||| ||||| || ||||| ||||| || | | || Sbjct 1707827 ACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCC 1707768 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || |||||||| |||||||| || | || ||||| || || || ||||| || Sbjct 1707767 ATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTT 1707708 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| ||||| || |||||||||||||| | ||| ||||| |||||||| Sbjct 1707707 GTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTAT 1707648 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || |||||||| || ||||| ||||| Sbjct 1707647 CGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 132 bits (146), Expect = 9e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||||||| ||||| | ||||| || || ||||| |||||||||||||| || ||||| Sbjct 1707044 CCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGCC 1706985 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| ||||||||||| | ||||||||| | ||||||||||||||||| | | Sbjct 1706984 TTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAGC 1706925 Query 82791 GTCTTTACAAATATCTGCATT 82811 || || ||||| || |||||| Sbjct 1706924 GTTTTCACAAAAATTTGCATT 1706904 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||| || | || || ||||| || || |||||||| ||||||||||| ||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| |||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| |||||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 104 bits (114), Expect = 5e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 || ||||| || || | |||||||||||| |||||||| || |||||||| || ||||| Sbjct 1706617 CCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTATTTTTGCC 1706558 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || |||||||| || ||||| | ||| || || | ||||| || ||||| || || Sbjct 1706557 TTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGCCCGTTAAA 1706498 Query 82791 GTCTTTACAAATATCTGCAT 82810 || || || || |||||||| Sbjct 1706497 GTTTTCACGAAAATCTGCAT 1706478 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 || || || || || | || ||||| || || || ||||| ||||| |||||||| || Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||||||||||||||| | ||| |||||||| |||||||| || || || | Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 82791 GTCTTTACAAATATCTGCATT 82811 || || ||||| || |||||| Sbjct 1707274 GTTTTGACAAAAATTTGCATT 1707254 >seq161 Length=136094 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 ||||| || || | | || || || || || ||||||||||| || ||||||||||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| ||||| ||||| | ||| ||||| | ||||| ||||| || ||||| Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAAT 37937 Query 82791 GTCTTTACAAATATCTGCATT 82811 || || || || ||||||||| Sbjct 37936 GTTTTCACGAAAATCTGCATT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981810217457650