Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 7e-11 >seq8 Length=2239894 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 131981 TTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTT 132040 ||||| | | | || | ||||| ||||| || || || ||||||||||| ||||||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 132041 TGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTC 132100 ||||| | ||| | ||||| | | ||| ||||| | ||| | |||||||||||| Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 132101 AGAGTTTTTATGAAAATCTGCAT 132123 | ||||| | || |||||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||| | ||| | | || || || |||||||| ||||| | || ||| | Sbjct 1707826 CGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCCA 1707767 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| || | | |||| |||||||| ||||| || || ||||||||||| Sbjct 1707766 TCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTTG 1707707 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || ||| | | ||| | ||||| | | || ||||| | || | | Sbjct 1707706 TCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTATC 1707647 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| | || || | ||| || ||||| Sbjct 1707646 GTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603157186000