Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 seq161 93.3 4e-14 >seq8 Length=2239894 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || || || || || |||||||| |||||||| ||||| || ||| | Sbjct 1707829 AGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGC 1707770 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || |||||||| || ||||| |||| ||||||||||||||| || ||||||||| Sbjct 1707769 CCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCT 1707710 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGT 134674 || || || | | || | || | || | |||| || || || | ||| || || | ||| Sbjct 1707709 TTGTCCTGGA-TCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGT 1707651 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || || ||||| |||||||| Sbjct 1707650 TATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| |||||||| |||||||| ||||| || ||| | || || Sbjct 1730484 ACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCATCTTCA 1730425 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || ||||| |||| ||||||||||||||| || |||||||| || || || Sbjct 1730424 AGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCTGG 1730365 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || || | |||||| || | ||| || | | ||||| || || Sbjct 1730364 ATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTCTTG 1730305 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | ||||| ||||||||||||||| Sbjct 1730304 CCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| |||||||| ||||| || ||||| || ||| | || || Sbjct 1733779 ACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCATCTTCA 1733720 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || ||||| |||| ||||||||||||||| || |||||||| || || || Sbjct 1733719 AGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGTCCTGG 1733660 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || || | |||||| || | ||| || | | ||||| || || Sbjct 1733659 ATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTGTCTTG 1733600 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | ||||| ||||||||||||||| Sbjct 1733599 CCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | || || ||||| || ||||| || ||||| ||||| |||||| Sbjct 1706617 CCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTATTTTTGCC 1706558 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||| ||||| | |||||| || || || || ||||| || |||||| Sbjct 1706557 TTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGCCCGTTAAA 1706498 Query 134694 GTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| ||||| Sbjct 1706497 GTTTTCACGAAAATCTGCAT 1706478 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||||||||| ||||||||||| || || || |||||||| |||||||||||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 1706219 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | ||| || || | || || || | || || |||||||| ||| Sbjct 1706218 GCTTTCACATTTTCGATTGTATCCGATGCCTCAACTTCTAACGTTATCGTTTTACCAGTT 1706159 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| Sbjct 1706158 AACGTTTTCACAAAGATCTGCAT 1706136 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||| ||||| | |||||||||||| ||||| || |||||||| || ||||| || Sbjct 1707394 CCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGCC 1707335 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || |||| ||| || || | || || |||||||| || | | Sbjct 1707334 TTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAGA 1707275 Query 134694 GTTTTAACGAAAATTTGCATT 134714 ||||| || |||||||||||| Sbjct 1707274 GTTTTGACAAAAATTTGCATT 1707254 >seq161 Length=136094 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || || ||||||||||||||||| ||||| || || ||||| || || ||||| ||| Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | || || || | ||| || || || || || || ||||| || || Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAAT 37937 Query 134694 GTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| |||||| Sbjct 37936 GTTTTCACGAAAATCTGCATT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505389871402000