Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq51 127 3e-24 >seq51 Length=402594 Score = 127 bits (140), Expect = 3e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 69499 TATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCA 69558 || || ||||| || ||| ||||| ||||||||| ||| || | ||| ||| ||||| Sbjct 115708 TACTGAGTATAAAGTTTTTCAAATTCCTCTCCCCAACAATCTTCAAGTCCGGGAGATTCA 115767 Query 69559 TTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGA 69618 |||||||||| |||||| || |||| || ||||| ||||| || ||||||||| Sbjct 115768 GAAGGACACATCAGTGACCAATCACTATCACTGTTTACTCGGTTCATGAAAAGATCGGGA 115827 Query 69619 ATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 | ||| | | | | ||||||||||| | | ||||| || ||||||| | Sbjct 115828 ACCCATAAACCAAAAAAGAGATCTCGACAACGCTCCAATTCATCGCCGAAATTTTTTCTT 115887 Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 | ||| ||| | || | |||||| | |||||||||||| | |||||| || | |||| Sbjct 115888 AAATCTAGATATTCAAAAATATCGGCATGCCATGGTTCCAAATATATTGCAAAAGCTCCA 115947 Query 69739 GGTCG 69743 ||||| Sbjct 115948 GGTCG 115952 Score = 100 bits (110), Expect = 4e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 69081 AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT 69140 ||| ||||||||||| || | ||| || || |||||||| || |||||||| | ||||| Sbjct 114911 AAGTATAAATGCATCAGCAAGTCCTTGCACTCCAATACCAATTGGTCTATGGCGTTTATT 114970 Query 69141 TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || |||| |||||| || | |||||| ||||| ||| |||| |||||| |||||| Sbjct 114971 AGATCTTTTAGCTTCCGGTACTGGATAAAAATTACCATCAATAACTTTATTTAGATTT 115028 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 68743 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCA 68802 |||||||||| ||||| || || || || ||| ||| |||||||| || |||||||| Sbjct 114378 CGAGTGTAAACGTTACTCGTGTAAGGCTCAACACTTTCGTTATTTCCAAGTATTTGAGCT 114437 Query 68803 GTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATG 68852 || || ||||||||||| || || | ||||| || || | ||||||||| Sbjct 114438 GTAGAAGCAGTTGGCATTGGCGCTAATAATAAGCTGTTACGAAGACCATG 114487 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/151 (73%), Gaps = 10/151 (7%) Strand=Plus/Plus Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 ||||| |||| || ||||| | |||||| || | ||| || ||||| ||||| ||| Sbjct 118110 TCAATGACTGAATCGATATCGTCTTTATGAATACCGACCGCTACTCGCATAAACATGTGC 118169 Query 70117 TGAGGTCGTTCTACCGTTTTATT----ATTTATTT-TCAACAGGTATGATTTTTCCAGAG 70171 || || ||||||| | || ||| |||| |||| ||||| ||| | || || | Sbjct 118170 TGTGGACGTTCTA-----TAATGCCGGATTCATTTCTCAAAAGGTAAGATCTCTCAAGCG 118224 Query 70172 TTTTAAACCCAAAATAGTTGTATGAAAAGTC 70202 |||||||||||||||| || | |||||||| Sbjct 118225 TTTTAAACCCAAAATATGTGAAAGAAAAGTC 118255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686897208414000