Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq8 102 7e-17 >seq8 Length=2239894 Score = 102 bits (112), Expect = 7e-17 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 27013 AATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 ||||| ||||| || || | || | || | ||| | ||| || || || |||||||| Sbjct 1733806 AATTAATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTA 1733747 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 ||||| | ||||| | ||||| || || || || || | || |||||||| ||| Sbjct 1733746 TAGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGA 1733687 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | || || || || ||||||| ||| | | |||| ||||| | | Sbjct 1733686 TCGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAG 1733627 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| ||| || || | ||||||||||| ||||| || || |||||||| Sbjct 1733626 GCTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 27013 AATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 ||||| ||||| || || | || | || | ||| | ||| || || || ||||| || Sbjct 1730511 AATTAATTGCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTA 1730452 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 ||||| | ||||| | ||||| || || || || || | || |||||||| ||| Sbjct 1730451 TAGTCAGAAAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGA 1730392 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | || || || || ||||||| ||| | | |||| ||||| | | Sbjct 1730391 TCGGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAG 1730332 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| ||| || || | ||||||||||| ||||| || || |||||||| Sbjct 1730331 GCTTCGACTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||| ||| |||| |||||||| ||||||||||| | ||| |||||||| |||||| Sbjct 1707395 ACCTGCGAAAATAAGACGCTGCTGATCCGGCGGGATACCTTCTTTATCCTGAATCTTGGC 1707336 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 || | |||| | || |||| ||||| ||||| | ||||| | ||| || || || Sbjct 1707335 CTTAACATTTTCAATCGTATCTGACGCTTCGACTTCCAATGTTATCGTTTTACCAGTAAG 1707276 Query 27227 AGTTTTCACAAAGATTTGCAT 27247 |||||| ||||| |||||||| Sbjct 1707275 AGTTTTGACAAAAATTTGCAT 1707255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424927408501200