Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 143 3e-29 seq161 107 2e-18 >seq8 Length=2239894 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || |||||| | || || ||||| || ||| | || || || || Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || || || |||||||| || || || || || || ||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || || || || || |||| || || || | |||||||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||||||||| || |||||||||| ||||| Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGTCTTCGTGGTGG 1707838 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || ||||| || |||||||| ||||| | | || || | Sbjct 1733570 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1733629 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | | | | || || || || ||||||||||| || || || || || || Sbjct 1733630 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1733689 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || |||||||| || |||| || || || | |||||||| Sbjct 1733690 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1733749 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || |||||||| || |||||||| || | |||||||| ||||| Sbjct 1733750 TATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGG 1733797 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || ||||| || |||||||| ||||| | | || || | Sbjct 1730275 AATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTC 1730334 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | | | | || || || || ||||||||||| || || || || || || Sbjct 1730335 TGACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCA 1730394 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || |||||||| || |||| || || || | |||||||| Sbjct 1730395 GCAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAA 1730454 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| || | |||||||| ||||| Sbjct 1730455 CATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGG 1730502 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || ||||||||||| || || || || | |||||||| | Sbjct 1729790 AATGCAAATTTTCGTAAAAACGCTTACCGGTAAAACGATAACATTGGAGGTTGAAGAATC 1729849 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| ||| |||| || ||||||||| | |||||||| || || ||||| || Sbjct 1729850 GGATACTATTGAGAATGTGAAAGCAAAAATTCAGTATAAGGAGGGTATACCACCAGATCA 1729909 Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546 ||| || || |||||||||||| Sbjct 1729910 GCAACGCCTTATTTTTGCTGGT 1729931 Score = 91.5 bits (100), Expect = 2e-13 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTC 27461 ||||||||| |||||||| || ||||| || || || || || | || || || ||| Sbjct 1707254 AATGCAAATTTTTGTCAAAACTCTTACTGGTAAAACGATAACATTGGAAGTCGAAGCGTC 1707313 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || ||| |||| |||| | ||||| || |||||||| || || || || || || || Sbjct 1707314 AG---ATACGATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCGCCGGA 1707370 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGT 27546 ||||||||||| ||||| || ||| Sbjct 1707371 TCAGCAGCGTCTTATTTTCGCAGGT 1707395 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| | ||| || |||||||| || || || || | | || || || || Sbjct 1729388 AATGCAAATTTGTGTAAAAACGCTTACTGGTAAAACGATAGCATTGGAAGTCGAAGCATC 1729447 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| | ||| ||| | ||||| || |||||| | || ||||| || || |||||||| Sbjct 1729448 GGATACCGTTGAGAATGTAAAGGCGAAGATTCAGTATAAAGAGGGTATACCACCAGACCA 1729507 Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546 |||||| || ||||| ||| || Sbjct 1729508 GCAGCGCCTTATTTTCGCTAGT 1729529 >seq161 Length=136094 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || | || || ||||| || || ||||| ||||| || Sbjct 37916 AATGCAGATTTTCGTGAAAACATTGACTGGTAAGACAATAACACTTGAAGTTGAAGCATC 37975 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| ||| | ||||| || |||||||||||||| |||||||| || ||||| Sbjct 37976 GGATACTATTGAGAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCCGACCA 38035 Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546 ||||||| | ||||| |||||| Sbjct 38036 GCAGCGTTTGATTTTCGCTGGT 38057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300776012000