Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8 125 4e-24 >seq8 Length=2239894 Score = 125 bits (138), Expect = 4e-24 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||| || | ||| ||||| ||||| ||||||||||| || || Sbjct 1707839 GCCACCACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGA 1707780 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || ||| | |||||||| ||||| || ||||| || | |||||| || || || || Sbjct 1707779 AAGCGTGCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1707720 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCT-TCGCTCTCC 34656 | || || ||||| |||| || | ||||||| | ||| || ||| ||| || Sbjct 1707719 GATGCCTTCTTTGTCCTGGATC-TTGGCTTTAACGTTTTCAATCGTATCTGATGCT-TCG 1707662 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | |||||||| || || |||||||| ||||| || || ||||| Sbjct 1707661 ACTTCTAAAGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | || | ||| || || ||||| ||||||||||| || || Sbjct 1730503 GCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGA 1730444 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| ||| | ||||||||||| || || ||||| || | |||||| || || || || Sbjct 1730443 AAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1730384 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| |||||| ||||| || | |||||||| | || | Sbjct 1730383 GATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCT-CTATTGTGTCAGAGGCTTCGA 1730325 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | | || || || || || || | |||||| || ||||| ||||| Sbjct 1730324 CTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1730276 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | || | ||| || || ||||| ||||| ||||| || || Sbjct 1733798 GCCACCACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGA 1733739 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| ||| | ||||||||||| || || ||||| || | |||||| || || || || Sbjct 1733738 AAGTGTGCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGG 1733679 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| |||||| ||||| || | |||||||| | || | Sbjct 1733678 GATGCCTTCCTTGTCCTGGATCTTGGCTTTTACACTCT-CTATTGTGTCAGAGGCTTCGA 1733620 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | | || || || || || || | |||||| || ||||| ||||| Sbjct 1733619 CTGCTAACGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCAT 1733571 Score = 89.7 bits (98), Expect = 3e-13 Identities = 110/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| ||||| || || ||||| || || || || | ||| || || ||| ||| ||| Sbjct 1706278 TTACCCGCAAAAATCAATCGCTGCTGATCAGGTGGAATTCCTTCTTTATCT-TGAATTTT 1706220 Query 34624 TGTTTTAACGATAAA-ATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCG 34680 || ||| || | ||||| || || | ||| ||||| | |||||||||||||| Sbjct 1706219 TGCTTTCACATTTTCGATTGTATC--CGATGCCTCAACTTCTAACGTTATCGTTTTACCA 1706162 Query 34681 GTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||||||||||||| |||||||| Sbjct 1706161 GTTAACGTTTTCACAAAGATCTGCAT 1706136 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 34566 ACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG 34625 ||| |||||||||| |||||||||||||| || | || ||||| ||| || ||||| Sbjct 1707045 ACCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTAT-TTTTG 1706987 Query 34626 TTTTAACGATAA-AATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683 ||||| | ||| || || |||| || ||||| | |||||||| || || || Sbjct 1706986 CCTTAACATTCTCAATCGTATCCGACGCT-TCTACTTCAAGCGTTATCGTCTTGCCTGTA 1706928 Query 34684 AACGTTTTCACAAAAATCTGCAT 34706 | ||||||||||||||| ||||| Sbjct 1706927 AGCGTTTTCACAAAAATTTGCAT 1706905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314724421714550