Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq8 129 5e-25 >seq8 Length=2239894 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| ||||| |||||| | ||||| | | ||| ||| | || Sbjct 1730276 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1730335 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| || || || ||||| |||||||| ||||||||||| Sbjct 1730336 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1730395 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||| | ||||| | || |||| || || ||| Sbjct 1730396 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAC 1730455 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||||| ||||| ||||| | ||| | ||| | ||| | || ||||||| Sbjct 1730456 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGGCA 1730504 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || || || | || || ||| | || ||| | ||||| ||| | || Sbjct 1707612 ATGCAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCA 1707671 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || ||| || || || |||||||||||||| ||||||||||| Sbjct 1707672 GATACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAG 1707731 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || ||||| | ||||| | || |||| || || ||| Sbjct 1707732 CAGCGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAAC 1707791 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||||| ||||| ||||| | ||| | ||| ||||| | || ||||||| Sbjct 1707792 ATTCAGAAGGAATCGACTCTTCATCTTGTTCTGCGTCTTCGTGGTGGCA 1707840 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| ||||| |||||| | ||||| | | ||| ||| | || Sbjct 1733571 ATGCAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCT 1733630 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| || || || ||||| |||||||| ||||||||||| Sbjct 1733631 GACACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAG 1733690 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||| | ||||| | || |||| || || || Sbjct 1733691 CAGCGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAAT 1733750 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||||| ||||| ||||| | ||| | ||| | ||| | || ||||||| Sbjct 1733751 ATTCAGAAGGAATCGACGCTTCATCTTGTTCTTCGTCTTCGTGGTGGCA 1733799 Score = 89.7 bits (98), Expect = 4e-13 Identities = 77/93 (83%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGAC 27184 || ||||||||||||||| | |||| | || || |||||||| || |||||||| ||||| Sbjct 1706815 GGTAAACAATTGGAAGAC-GGTCGAACATTATCAGATTACAATATACAAAAGGAATCGAC 1706873 Query 27185 CTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||| |||||||||| ||| |||| || || Sbjct 1706874 CTTGCATCTGGTTTTGCGATTGAGGGGGGGAAT 1706906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434911060752000