Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 134 3e-26 >seq8 Length=2239894 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| |||||||| || || || || |||||||| || | ||| || Sbjct 1707833 ACGAAGACGCAGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGT 1707774 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||| || || || ||||| || || || || || || || | || Sbjct 1707773 GCGCCCATCTTCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1707714 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||||||||| ||| |||||||| || || || || ||| || || | Sbjct 1707713 TTCTTTGTCCTGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAA 1707654 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| || || | ||||| || || | ||||| Sbjct 1707653 AGTTATCGTCTTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| ||||| || || || || || |||||||| || | ||| || Sbjct 1730497 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGT 1730438 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || || ||||| || || || || || || || | || Sbjct 1730437 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1730378 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| ||| || | || || ||||||||| ||| || | | Sbjct 1730377 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1730318 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| || || ||||| || | |||||| Sbjct 1730317 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 127 bits (140), Expect = 5e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| ||||| || || || || || || ||||| || | ||| || Sbjct 1733792 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGT 1733733 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || || ||||| || || || || || || || | || Sbjct 1733732 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1733673 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| ||| || | || || ||||||||| ||| || | | Sbjct 1733672 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1733613 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| || || ||||| || | |||||| Sbjct 1733612 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||| || ||||| || |||||||||||||| || || || | ||| || || || || | Sbjct 1706625 GCTACTCACCTGCAAAAATAAGGCGTTGTTGATCTGGTGGTATTCCCTCTTTATCTTGTA 1706566 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 | ||| ||||| |||||||| || || ||| ||| ||||| || || || || || | Sbjct 1706565 TTTTTGCCTTCACATTTTCGATTGTATCGGAGGCTTCCACCTCAAGCGTTATTGTTTTGC 1706506 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| | ||| || || || | |||||| Sbjct 1706505 CCGTTAAAGTTTTCACGAAAATCTGCAT 1706478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159131950292750