Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq8 145 2e-29 seq134 127 5e-24 seq161 87.8 4e-12 >seq8 Length=2239894 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || || || ||||| || || | ||| || || | | || Sbjct 1733792 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGT 1733733 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| || ||||| || || ||||| || || || || ||||| || || || Sbjct 1733732 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1733673 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| || ||| || || ||||| |||| ||| || |||| Sbjct 1733672 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1733613 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || ||||||||||||| ||||||| ||| | ||||||| Sbjct 1733612 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || || || ||||| || || | || || || | | || Sbjct 1730497 ACGAAGACGAAGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGT 1730438 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| || ||||| || || ||||| || || || || ||||| || || || Sbjct 1730437 GCGCCCATCTTCAAGTTGCTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCC 1730378 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| || ||| || || ||||| |||| ||| || |||| Sbjct 1730377 TTCCTTGTCCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAA 1730318 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || ||||||||||||| ||||||| ||| | ||||||| Sbjct 1730317 CGTAATTGTCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| || || || || |||||||| || || ||||||||||| ||||| || ||| | Sbjct 1707044 CCAGCAAATATTAGGCGCTGTTGGTCCGGTGGTATACCTTCCTTATCTTGTATTTTTGCC 1706985 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| || || || || || | ||| || || | ||| ||||||||||| || | Sbjct 1706984 TTAACATTCTCAATCGTATCCGACGCTTCTACTTCAAGCGTTATCGTCTTGCCTGTAAGC 1706925 Query 225694 GTTTTTATGAACACTTGCATT 225714 ||||| | || | ||||||| Sbjct 1706924 GTTTTCACAAAAATTTGCATT 1706904 >seq134 Length=166079 Score = 127 bits (140), Expect = 5e-24 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||| || |||||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct 29083 AAGATTTGTCCGTCAGTAATTGAAATTACATTAGTAGGAATATAAGCAGAAACATCACCT 29024 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||||| ||||||| |||||||| ||||||| |||||||||||| Sbjct 29023 GCTTGCGTTTCGATTACAGGTAAAGCTGTTAACGATCCACCACCA 28979 >seq161 Length=136094 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 |||||||| || | || || |||||||| ||||| ||||||||||| || |||||| | Sbjct 38056 CCAGCGAAAATCAAACGCTGCTGGTCGGGTGGAATTCCTTCCTTGTCCTGAATCTTTGCC 37997 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| || || || || || | ||| || || | || || ||||| || ||||| Sbjct 37996 TTGACATTCTCAATAGTATCCGATGCTTCAACTTCAAGTGTTATTGTCTTACCAGTCAAT 37937 Query 225694 GTTTTTATGAACACTTGCATT 225714 ||||| | ||| | |||||| Sbjct 37936 GTTTTCACGAAAATCTGCATT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192510572936900