Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq51 141 1e-28 >seq51 Length=402594 Score = 141 bits (156), Expect = 1e-28 Identities = 181/248 (73%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 77907 TATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCA 77966 || |||||||| || ||||||||| ||||||||| ||| || | ||| || ||||| Sbjct 115708 TACTGAGTATAAAGTTTTTCAAATTCCTCTCCCCAACAATCTTCAAGTCCGGGAGATTCA 115767 Query 77967 TTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGT 78026 || ||||||| |||||| |||| ||| || ||||| ||||| || ||||| || Sbjct 115768 GAAGGACACATCAGTGACCAATCACTATCACTGTTTACTCGGTTCATGAAAAGATCGGGA 115827 Query 78027 ATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC---TTCATTTCCTGTATTCTTT 78083 | ||||| | ||| ||| |||||||| | | | || ||||| || ||| ||| Sbjct 115828 ACCCATAAACCAAAAAAGAGATCTCGA---CAACGCTCCAATTCATCGCCGAAATTTTTT 115884 Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143 | | ||| ||| | || | |||||| | |||||||||||| | ||||||||| | | || Sbjct 115885 CTTAAATCTAGATATTCAAAAATATCGGCATGCCATGGTTCCAAATATATTGCAAAAGCT 115944 Query 78144 CCAGGTCG 78151 |||||||| Sbjct 115945 CCAGGTCG 115952 Score = 100 bits (110), Expect = 4e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 77489 AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 77548 ||| ||||| ||||| || | ||| || |||||||||||||| |||||||| | ||||| Sbjct 114911 AAGTATAAATGCATCAGCAAGTCCTTGCACTCCAATACCAATTGGTCTATGGCGTTTATT 114970 Query 77549 GGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || |||||||||| || | |||||| ||||| || |||| |||||| |||||| Sbjct 114971 AGATCTTTTAGCTTCCGGTACTGGATAAAAATTACCATCAATAACTTTATTTAGATTT 115028 Score = 86.0 bits (94), Expect = 9e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 77151 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 77210 |||||||||| ||||| || || || || ||| ||| || ||||| | |||||||| Sbjct 114378 CGAGTGTAAACGTTACTCGTGTAAGGCTCAACACTTTCGTTATTTCCAAGTATTTGAGCT 114437 Query 77211 GTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260 ||||||||||||||||| || || | ||||| || || | |||||||| Sbjct 114438 GTAGAAGCAGTTGGCATTGGCGCTAATAATAAGCTGTTACGAAGACCATG 114487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694657077464000