Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq51 125 1e-23 >seq51 Length=402594 Score = 125 bits (138), Expect = 1e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||||||| ||||||||| ||| || | || ||| ||||| |||||||||| ||| Sbjct 115725 TTCAAATTCCTCTCCCCAACAATCTTCAAGTCCGGGAGATTCAGAAGGACACATCAGTGA 115784 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 ||| |||| ||| || || || ||||| || ||||| || | ||||| | ||| ||| Sbjct 115785 CCAATCACTATCACTGTTTACTCGGTTCATGAAAAGATCGGGAACCCATAAACCAAAAAA 115844 Query 76639 TAGATCTCGGGTTCTACGTTC---TTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTC 76695 |||||||| | ||| || ||||| || ||| ||| | | |||||| | || Sbjct 115845 GAGATCTCGA---CAACGCTCCAATTCATCGCCGAAATTTTTTCTTAAATCTAGATATTC 115901 Query 76696 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCG 76746 | |||||| | |||||||||||| | |||||| || | | | || ||||| Sbjct 115902 AAAAATATCGGCATGCCATGGTTCCAAATATATTGCAAAAGCTCCAGGTCG 115952 Score = 105 bits (116), Expect = 1e-17 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 76084 AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 ||| ||||||||||| || ||||| || |||||||||||||| |||||||| | ||||| Sbjct 114911 AAGTATAAATGCATCAGCAAGTCCTTGCACTCCAATACCAATTGGTCTATGGCGTTTATT 114970 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 || ||| |||||| || | || ||| ||||| ||| |||| |||||| |||||| Sbjct 114971 AGATCTTTTAGCTTCCGGTACTGGATAAAAATTACCATCAATAACTTTATTTAGATTT 115028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712922369232000