Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 2e-15 >seq8 Length=2239894 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| || || || || || ||||| || || | | || | ||||||| Sbjct 1730487 AGAACAAGATGAAGCGTCGATTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGCCCATCT 1730428 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || | |||||| || | | ||| |||||||| | Sbjct 1730427 TCAAGTTGCTTT--CCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGT 1730370 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || ||| ||| |||||| |||| || || ||| | | ||||| | Sbjct 1730369 CCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTG 1730310 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | |||||||| || || || ||||| | |||||| Sbjct 1730309 TCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1730275 Score = 95.1 bits (104), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| || || || || || || || || || | | || | ||||||| Sbjct 1733782 AGAACAAGATGAAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGCCCATCT 1733723 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || | |||||| || | | ||| |||||||| | Sbjct 1733722 TCAAGTTGCTTT--CCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCCTTGT 1733665 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || ||| ||| |||||| |||| || || ||| | | ||||| | Sbjct 1733664 CCTGGATCTTGGCTTTTACACTCTCTATTGTGTCAGAGGCTTCGACTGCTAACGTAATTG 1733605 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | |||||||| || || || ||||| | |||||| Sbjct 1733604 TCTTGCCCGTCAGCGTTTTTACGAAAATTTGCATT 1733570 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||||||||| || || || || ||||| || || | | || | ||||||| Sbjct 1707823 AGAACAAGATGAAGAGTCGATTCCTTCTGAATGTTATAGTCAGAAAGCGTGCGCCCATCT 1707764 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| || | |||||| || | | ||| ||||| || || Sbjct 1707763 TCAAGCTGTTTTCCCGCAAAGATCAGACGCTGCTGATCGGGTGGGATGCCTTCTTTGTCC 1707704 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || | || | | ||||| || ||||| | ||| || || Sbjct 1707703 TGGATCTTGGCTTTAACGTTTTCAATCGTATCTGATGCTTCGACTTCTAAAGTTATCGTC 1707644 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||||||||| | ||||| Sbjct 1707643 TTCCCAGTTAACGTCTTCACGAATATTTGCAT 1707612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153800842505850