Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq8 149 2e-30 seq161 95.1 3e-14 >seq8 Length=2239894 Score = 149 bits (164), Expect = 2e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || | || || || ||||| || | || || ||| ||||| Sbjct 1707615 CAAATATTCGTGAAGACGTTAACTGGGAAGACGATAACTTTAGAAGTCGAAGCATCAGAT 1707674 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| ||||| |||||||||||||| ||||| || || ||||| Sbjct 1707675 ACGATTGAAAACGTTAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCCGATCAGCAG 1707734 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||||||||| |||||||| | || ||| | || |||||| | Sbjct 1707735 CGTCTGATCTTTGCGGGAAAACAGCTTGAAGATGGGCGCACGCTTTCTGACTATAACATT 1707794 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| || || ||||||||| || Sbjct 1707795 CAGAAGGAATCGACTCTTCATCTTGTTCTG 1707824 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || || || | | || ||| ||| ||| Sbjct 1730279 CAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCTGAC 1730338 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||| || ||| ||||| |||||||| ||||| ||||| || || ||||| Sbjct 1730339 ACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAGCAG 1730398 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| || || |||||||| | || ||| | || |||||| | Sbjct 1730399 CGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAACATT 1730458 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||||||||| Sbjct 1730459 CAGAAGGAATCGACGCTTCATCTTGTT 1730485 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || || || | | || ||| ||| ||| Sbjct 1733574 CAAATTTTCGTAAAAACGCTGACGGGCAAGACAATTACGTTAGCAGTCGAAGCCTCTGAC 1733633 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||| || ||| ||||| |||||||| ||||| ||||| || || ||||| Sbjct 1733634 ACAATAGAGAGTGTAAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCCGATCAGCAG 1733693 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| || || |||||||| | || ||| | || ||||| | Sbjct 1733694 CGTCTGATCTTTGCGGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGACTATAATATT 1733753 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||||||||| Sbjct 1733754 CAGAAGGAATCGACGCTTCATCTTGTT 1733780 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||||| || || |||||||| || | || || ||| ||||| Sbjct 1707258 CAAATTTTTGTCAAAACTCTTACTGGTAAAACGATAACATTGGAAGTCGAAGCGTCAGAT 1707317 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| |||||||| ||||| ||||| ||||| Sbjct 1707318 ACGATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCGCCGGATCAGCAG 1707377 Query 178044 CGACTTATCTTCGCCGG 178060 || ||||| ||||| || Sbjct 1707378 CGTCTTATTTTCGCAGG 1707394 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||| | || || ||||| || || || ||||||||| ||| || Sbjct 1706481 CAGATTTTCGTGAAAACTTTAACGGGCAAAACAATAACGCTTGAGGTGGAAGCCTCCGAT 1706540 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||| || || || ||||| ||||| || || || || ||| Sbjct 1706541 ACAATCGAAAATGTGAAGGCAAAAATACAAGATAAAGAGGGAATACCACCAGATCAACAA 1706600 Query 178044 CGACTTATCTTCGCCGG 178060 || ||||| || || || Sbjct 1706601 CGCCTTATTTTTGCAGG 1706617 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || |||||||| || | ||||| ||| || || Sbjct 1729794 CAAATTTTCGTAAAAACGCTTACCGGTAAAACGATAACATTGGAGGTTGAAGAATCGGAT 1729853 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||| |||||| | || || || || || || || |||||| Sbjct 1729854 ACTATTGAGAATGTGAAAGCAAAAATTCAGTATAAGGAGGGTATACCACCAGATCAGCAA 1729913 Query 178044 CGACTTATCTTCGCCGG 178060 || ||||| || || || Sbjct 1729914 CGCCTTATTTTTGCTGG 1729930 >seq161 Length=136094 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| | || || || || || || || || || ||| || || Sbjct 37920 CAGATTTTCGTGAAAACATTGACTGGTAAGACAATAACACTTGAAGTTGAAGCATCGGAT 37979 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| ||||||||||||||| |||||||| || || |||||||| Sbjct 37980 ACTATTGAGAATGTCAAGGCAAAGATTCAGGACAAGGAAGGAATTCCACCCGACCAGCAG 38039 Query 178044 CGACTTATCTTCGCCGG 178060 || | || ||||| || Sbjct 38040 CGTTTGATTTTCGCTGG 38056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203710379211900