Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq349 87.8 2e-12 seq927 86.0 7e-12 >seq349 Length=44324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575 || || || || || |||| |||||||||||||| || || || | ||||||||||||| Sbjct 28272 AGGATGAAAGCATCAGCTAGGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 28213 Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635 || || |||||||| | || ||||| ||| ||| |||| ||| || | ||||| Sbjct 28212 GATCGCTCTGCTTCTGGTACTGGGTAATAGTTACGATCGATAACTTTGTTCAAATTTCTA 28153 Query 53636 ACAATTACTTT 53646 || | |||||| Sbjct 28152 ACCACTACTTT 28142 >seq927 Length=24368 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 24633 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 24692 || || || || ||||| ||||||||| |||||| ||||| | || ||| ||||||||| Sbjct 10940 ACCTCATCAACAGTCCAGAATGATGCCAATGCCTTCTTATAAAAATCCCAAATGTCATGA 10999 Query 24693 TATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 24729 || |||| ||||| || || || | ||||||||||| Sbjct 11000 AATCGAATAGGAAATATGACGAAACGATTTGGATTTT 11036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593661648961440