Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq100 98.7 1e-15 seq271 93.3 6e-14 >seq100 Length=72284 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | |||||| |||| || ||||| || || | ||| | ||| | Sbjct 23559 AATGCAGATATTCGTGAAGACATTAACTGGAAAAACAATCACCCTTGAGGTGGAATCGTC 23618 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| |||||||| |||||||| || || || |||||||| Sbjct 23619 TGATACTATTGAGAATGTAAAGGCTAAAATTCAGGATAAAGAGGGCATTCCGCCTGATCA 23678 Query 124658 ACAAAGGCTTATTTTTGCAGGAAA 124681 |||| | |||||||| ||||| || Sbjct 23679 ACAACGACTTATTTTCGCAGGTAA 23702 >seq271 Length=49288 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| |||||||||| || || ||| |||| |||| || | Sbjct 36595 ATGCAAATTTTTGTGAAGACGTTAACAGGCAAGACGATCACTCTAGAAGTTGAGGCTTCT 36654 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| |||| || ||||| || |||||||| || ||||| ||||| Sbjct 36655 GACACGATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 36714 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACA 124684 || | ||||||||||| || || || Sbjct 36715 CAGCGTCTTATTTTTGCCGGTAAGCA 36740 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | |||||||| || |||||||||||||| | ||| | ||||| Sbjct 36926 ATGCAGATTTTTGTTAAGACACTTACTGGCAAAACTATAACACTGGAGGTGGAAGCGTCG 36985 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || || || || |||||||| ||||| |||||||| || Sbjct 36986 GATACGATCGAGAATGTGAAGGCTAAGATCCAGGATAAAGAGGGTATCCCACCTGACCAG 37045 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 ||| | |||||||| || || Sbjct 37046 CAACGACTTATTTTCGCGGG 37065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755379717830400