Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq349 87.8 3e-12 >seq349 Length=44324 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 79485 || || || || || |||| |||||||||||||| || || || | ||||||||||||| Sbjct 28272 AGGATGAAAGCATCAGCTAGGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 28213 Query 79486 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545 || || |||||||| | || ||||| ||| ||| |||| ||| || | ||| || Sbjct 28212 GATCGCTCTGCTTCTGGTACTGGGTAATAGTTACGATCGATAACTTTGTTCAAATTTCTA 28153 Query 79546 ACTATTACttt 79556 || | |||||| Sbjct 28152 ACCACTACTTT 28142 Score = 87.8 bits (96), Expect = 3e-12 Identities = 151/216 (70%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 79061 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCG 79120 || |||| | ||||||||| || | |||||||| | ||| |||||||| ||||| | Sbjct 28883 CTGGAAACT-TCCAGACAAGACGTTACGAGTGTATACATTGCTGGTATAAGGTTCAATAC 28825 Query 79121 ATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAAC 79180 |||||| ||||| | ||||| || ||||| || || ||||| || || | || | | Sbjct 28824 TTTCATTGTTTCCAAGTATTTGTGCGGTTGAAGCAGTAGGCATTGGAGCTAATAACACGC 28765 Query 79181 TATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATC 79238 |||| | | |||| || ||| || || || || | |||||||||||| |||| Sbjct 28764 TATTCCGGATGCCGT--GAACTGCGATCTTCTCACGTAAACTTTCCCAATCCCACTGATC 28707 Query 79239 AGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 | ||| |||| ||| | |||| |||| | ||| Sbjct 28706 TGTCGGCGTCACATCCCACATATCAAATTGCAAAAT 28671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718196272807920