Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq271 91.5 1e-13 >seq271 Length=49288 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || || || | ||||| | ||||| ||| | ||| Sbjct 36595 ATGCAAATTTTTGTGAAGACGTTAACAGGCAAGACGATCACTCTAGAAGTTGAGGCTTCT 36654 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||||||||| |||||||| || || Sbjct 36655 GACACGATTGAAAATGTAAAGGCCAAGATTCAG-GACAAAGAAGGAATTCCACCAGATCA 36713 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACA 25144 ||||| ||||||||||||| || || Sbjct 36714 GCAGCGTCTTATTTTTGCCGGTAAGCA 36740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433285338587570