Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq100 111 3e-19 seq4064 86.0 1e-11 seq724 86.0 1e-11 >seq100 Length=72284 Score = 111 bits (122), Expect = 3e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || |||| |||||| || || |||||||| || || || ||||| || Sbjct 23702 TTACCTGCGAAAATAAGTCGTTGTTGATCAGGCGGAATGCCCTCTTTATCCTGAATTTTA 23643 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || ||| || || || | ||||| || || | |||||| |||||||| || Sbjct 23642 GCCTTTACATTCTCAATAGTATCAGACGATTCCACCTCAAGGGTGATTGTTTTTCCAGTT 23583 Query 68439 AGGGTCTTGACGAATATCTGCATTATGCT 68467 | ||||| ||||||||||||||| |||| Sbjct 23582 AATGTCTTCACGAATATCTGCATTTTGCT 23554 >seq4064 Length=4025 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || | |||| |||||||||| Sbjct 3584 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 3525 Query 84516 CCCACATCGGGC 84527 ||| |||||||| Sbjct 3524 CCCGCATCGGGC 3513 >seq724 Length=29041 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || | |||| |||||||||| Sbjct 6693 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 6752 Query 84516 CCCACATCGGGC 84527 ||| |||||||| Sbjct 6753 CCCGCATCGGGC 6764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921529339178160