Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq3338 118 3e-22 >seq3338 Length=5677 Score = 118 bits (130), Expect = 3e-22 Identities = 138/185 (75%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 42806 GCGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCG 42865 |||||||||||||| || | |||| | |||| ||| || || ||||||| || | ||| Sbjct 1655 GCGCCGAAGCGCAGCGCATTCATGGCTGCGATCGGCCGGGCACCCATGGTGAACACATCG 1596 Query 42866 CGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGG 42925 || | ||| ||||| ||||| |||||||| ||||| | |||||||| | || |||||| Sbjct 1595 CGCAGGATACCGCCGACACCGGTCGCCGCACCCTGATAAGGCTCGATATAGGACGGGTGG 1536 Query 42926 TTGTGACTCTCCGCCTTGAACGTGACCGCCCA---TCCCTCGCCGACGTCGATGACGCCC 42982 ||||| |||||| |||||| ||| | || || ||||||| |||| || || Sbjct 1535 TTGTGGCTCTCCATCTTGAA---GACAACGCAGTCGCCATCGCCGATATCGACAACACCG 1479 Query 42983 GCGTT 42987 ||||| Sbjct 1478 GCGTT 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148232179278772