Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq271 102 8e-17 >seq271 Length=49288 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| |||||| |||| || |||||||| || || |||||||||||||| || || || Sbjct 36740 TGCTTACCGGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATC 36681 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||||||| || | || ||| || || ||||||| ||| | |||||||| Sbjct 36680 TTGGCCTTTACATTTTCAATCGTGTCAGAAGCCTCAACTTCTAGAGTGATCGTCTTGCCT 36621 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || || ||||||||||| Sbjct 36620 GTTAACGTCTTCACAAAAATTTGCAT 36595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 |||||| | || || |||||||| || || ||||||||||| || || || ||||| | Sbjct 36324 CCGGCAAAGATTAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTTGGCC 36265 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || ||| ||| | |||||| || |||||||| | || | || || || || | | Sbjct 36264 TTAACATTCTCGATGGTATCAGATGCCTCCACTTCCAATGTAATTGTTTTACCAGTAAGA 36205 Query 64424 GTTTTTACGAAAATTTGCAT 64443 |||||||| ||||||||||| Sbjct 36204 GTTTTTACAAAAATTTGCAT 36185 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| | |||||||| || || ||||| || ||||| |||||||| |||||| Sbjct 35918 CCAGCAAAAATCAAGCGCTGCTGATCTGGTGGAATACCCTCTTTATCTTGTAT-TTTTGC 35860 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| ||| || | || || || |||||||| | || | ||||| || ||||| Sbjct 35859 TTTCACATTTTCAATCGTGTCTGAAGCTTCCACTTCAAGGGTGATCGTCTTTCCCGTCAA 35800 Query 64423 AGTTTTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| || Sbjct 35799 TGTCTTTACGAAGATTTGCATGTT 35776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499594348366320