Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq100 84.2 2e-11 seq271 82.4 7e-11 >seq100 Length=72284 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/82 (84%), Gaps = 4/82 (5%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 ||||||||| ||||| ||||| |||||||| |||||||||||||| |||| || || || Sbjct 24108 CCTCAACACAAGATGAAGCGTCGATTCCTTCTGGATATTATAATC--TGACAGTGTTCGA 24051 Query 45185 --ATCGTCCAATTGTTTTCCTG 45204 ||| ||||||||||| |||| Sbjct 24050 CCATCCTCCAATTGTTTACCTG 24029 >seq271 Length=49288 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACG 45275 || ||||| || || ||||| |||||||| || ||||| || || | ||| | Sbjct 36719 CGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATC 36660 Query 45276 GTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATT 45335 ||||| |||| ||| ||||| ||||| | ||| ||||| |||| || || ||||||||| Sbjct 36659 GTGTCAGAAGCCTCAACTTCTAGAGTGATCGTCTTGCCTGTTAACGTCTTCACAAAAATT 36600 Query 45336 TGCAT 45340 ||||| Sbjct 36599 TGCAT 36595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451957558976880