Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18]
8,078 sequences; 82,568,297 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq24 141 4e-28
seq467 140 1e-27
seq100 102 3e-16
seq271 93.3 2e-13
>seq24
Length=111638
Score = 141 bits (156), Expect = 4e-28
Identities = 200/276 (72%), Gaps = 5/276 (2%)
Strand=Plus/Plus
Query 452219 ATTCAAGTGTTT--GAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAAT 452276
|||| || |||| ||||| |||||||| |||||| |||| || || || || |||
Sbjct 50435 ATTCCAG-GTTTACGAAGGTGAACGTGCGATGACAAGAGACAACAACTTGCTGGGCAAAT 50493
Query 452277 TTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATG 452336
| ||||| ||||| ||| || | || || ||||| ||| |||| | ||
Sbjct 50494 TCGAACTTTCTGGAATTCCACCTGCTCCTCGTGGTGTGCCACAAATCGAAGTTACATTTG 50553
Query 452337 ATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAG 452396
| ||||||||||||||||| | ||||| |||| || ||||| | || || ||
Sbjct 50554 ACATTGATGCAAATGGTATTTTGAATGTCTCTGCACAGGATAAATCCACAGG-CAAGCAC 50612
Query 452397 AA-AAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATG 452455
|| ||||||||||| || || |||||| |||||| || || || || || |||||||||
Sbjct 50613 AACAAAATTACAATCACCAACGATAAAGGCCGTTTGTCAAAGGACGAAATCGAAAAAATG 50672
Query 452456 GTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491
||| | ||||| ||||||| ||||| |||||| |||
Sbjct 50673 GTACAGGAAGCCGAAAAATACAAGGCTGATGACGAA 50708
Score = 132 bits (146), Expect = 2e-25
Identities = 172/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|||||||| || || ||||| || | || ||||||||||||||||||||||| ||||
Sbjct 53866 TATAAAGGCGAGACAAAAACCTTCACGCCAGAAGAAATTTCATCTATGGTTCTGGTTAAA 53925
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| ||||| || || || | | ||| | | || | ||||| || || || ||
Sbjct 53926 ATGAAGGAAACGGCTGAGGCATTTCTCGGTCATGCGGTCAAGGATGCGGTTATCACAGTC 53985
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
||||| || || || || |||| || ||||| || |||||| | || ||||| |||
Sbjct 53986 CCCGCGTACTTTAACGACTCACAGCGACAAGCGACCAAAGATTCTGGCGCAATTGCGGGT 54045
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAG 451454
| || || | || || || || ||||| ||||| |||||| | || || || ||||
Sbjct 54046 CTGAACGTCTTACGTATCATCAACGAACCGACAGCGGCTGCTATTGCTTACGGTCTAG 54103
Score = 114 bits (126), Expect = 5e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378
||||| ||| | || || || |||||||| || ||| | ||||| |||||||||||||||
Sbjct 48884 GATGCCGTAGTAACCGTGCCAGCTTATTTTAACGATTCTCAACGACAAGCAACTAAAGAT 48943
Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
|| ||| |||||||| | || ||||| ||||| || |||||||| || |||||||||
Sbjct 48944 GCGGGAGCCATTGCTGGCCTGAACGTTCTCCGAATCATCAATGAACCAACTGCAGCTGCT 49003
Query 451439 CTAGCATATGG 451449
| || |||||
Sbjct 49004 ATTGCGTATGG 49014
>seq467
Length=38392
Score = 140 bits (154), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 451231 TAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGC 451290
|||||| || ||||||||||| || ||| | |||||||| ||||||||||||| ||
Sbjct 32685 TAAAACCTTCGCTCCTGAAGAGATATCAGCAATGGTTCTCGGAAAAATGAAAGAAATTGC 32744
Query 451291 AGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAA 451350
||| |||| | || ||| | |||| || | || || || ||||| || ||
Sbjct 32745 TGAAGCATATTTGGGAAAGGAAGTGAAACATGCGGTTGTCACGGTACCTGCTTACTTTAA 32804
Query 451351 TGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCG 451410
|||||| ||||| ||||| ||||||||||| || |||||| ||| | |||||| | ||
Sbjct 32805 TGATGCTCAACGTCAAGCTACTAAAGATGCTGGTACTATTGCCGGTCTCAATGTTGTCCG 32864
Query 451411 AATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
||||| ||||||||||| || || ||| | || || || || ||| ||
Sbjct 32865 TATTATCAATGAACCTACGGCTGCCGCTATCGCTTACGG-CTTGGATAA 32912
Score = 93.3 bits (102), Expect = 2e-13
Identities = 162/236 (69%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
||||| |||||||||||||||||||| || ||||| || || | | || | ||||
Sbjct 33939 AATCCGGATGAAGCTGTTGCATATGGCGCAGCAGTCCAGGCTGGTGTTAT------TTCA 33992
Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110
| || |||| || |||||| | || | ||||| | ||| | |||||||| ||
Sbjct 33993 GGCGAAGAAAGCACTGGTGATATTGTATTGTTGGATGTGAATCCTTTGACTCTTGGAATT 34052
Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAA 452170
|||||| |||||| | ||||| || | ||| || || ||| ||| ||| ||
Sbjct 34053 GAAACAATTGGTGGTGTTATGACCAAACTTATTCAAAGAAACACTGTTATCCCTACCAAG 34112
Query 452171 AAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGT 452226
|||||||| | || ||| ||| |||||| || ||| || || ||||| ||
Sbjct 34113 AAGAGTCAGATCTTCTCTACGGCAGCTGATAATCAGCCAACAGTCACCATTCAGGT 34168
>seq100
Length=72284
Score = 102 bits (112), Expect = 3e-16
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || ||||| || ||| | ||||| ||||| || || ||||| || ||||| ||
Sbjct 23559 AATGCAGATATTCGTGAAGACATTAACTGGAAAAACAATCACCCTTGAGGTGGAATCGTC 23618
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| ||||| | | || |||||||| ||||| || || ||||| ||||||||
Sbjct 23619 TGATACTATTGAGAATGTAAAGGCTAAAATTCAGGATAAAGAGGGCATTCCGCCTGATCA 23678
Query 391169 ACAACGTTTAATTTTCTCAGGGAA 391192
|||||| | |||||| |||| ||
Sbjct 23679 ACAACGACTTATTTTCGCAGGTAA 23702
>seq271
Length=49288
Score = 93.3 bits (102), Expect = 2e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || ||||| || ||||||||||| ||||| | || || || |||||
Sbjct 36185 ATGCAAATTTTTGTAAAAACTCTTACTGGTAAAACAATTACATTGGAAGTGGAGGCATCT 36244
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | |||| ||||| || ||||||||||||||||| || |||||
Sbjct 36245 GATACCATCGAGAATGTTAAGGCCAAAATCCAGGATAAGGAAGGAATTCCACCAGATCAG 36304
Query 391170 CAACGTTTAATTTT 391183
|| || |||| ||
Sbjct 36305 CAGCGACTAATCTT 36318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975513914380424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |