Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq467 161 1e-34 seq24 150 2e-31 seq351 109 7e-19 >seq467 Length=38392 Score = 161 bits (178), Expect = 1e-34 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 |||||||| | ||||| |||||||| || ||||| |||||||| |||||||| | | Sbjct 32915 TTCTTATCCAAGCCGTAAGCGATAGCGGCAGCCGTAGGTTCATTGATAATACGGACAACA 32856 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || |||||||| | |||||||| || ||||| ||||| | ||| |||||||| Sbjct 32855 TTGAGACCGGCAATAGTACCAGCATCTTTAGTAGCTTGACGTTGAGCATCATTAAAGTAA 32796 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || ||||| || ||||| | | |||| ||| || | ||| | ||| || || ||| Sbjct 32795 GCAGGTACCGTGACAACCGCATGTTTCACTTCCTTTCCCAAATATGCTTCAGCAATTTCT 32736 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 |||||||| |||||||| | ||| |||||||||| Sbjct 32735 TTCATTTTTCCGAGAACCATTGCTGATATCTCTTCAG 32699 >seq24 Length=111638 Score = 150 bits (166), Expect = 2e-31 Identities = 186/252 (74%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACA 7653 || || || |||||||| || ||||| ||||| || ||||| || || ||||| ||||| Sbjct 54110 TTTTTGTCTAGACCGTAAGCAATAGCAGCCGCTGTCGGTTCGTTGATGATACGTAAGAC- 54052 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||||| || ||||| | | | |||||| ||||||||||| || || ||||||||||| Sbjct 54051 GTTCAGACCCGCAATTGCGCCAGAATCTTTGGTCGCTTGTCGCTGTGAGTCGTTAAAGTA 53992 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 || ||||| || | ||||| ||| |||| | ||||||| | | || || | || Sbjct 53991 CGCGGGGACTGTGATAACCGCATCCTTGACCGCATGACCGAGAAATGCCTCAGCCGTTTC 53932 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 |||||||| |||||||| |||||||| ||||| | || || ||| || || || Sbjct 53931 CTTCATTTTAACCAGAACCATAGATGAAATTTCTTCTGGCGTGAAGGTTTTTGTCTCGCC 53872 Query 7834 GTTAAAATCAAC 7845 ||| | ||||| Sbjct 53871 TTTATATTCAAC 53860 Score = 143 bits (158), Expect = 3e-29 Identities = 187/259 (72%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||| ||||| || ||||||| || |||||||| ||| |||| || | || | Sbjct 54941 CCTCATCTGGGTTGATGCTTTTATTGAGCTCTTTACCAGAAAAGAAATCTGACAGCAACT 54882 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || | ||||||||| || || |||||||| || | || || || | |||| || || Sbjct 54881 TCTGTACTTTCGGGATACGGGTTGATCCACCAACTAGTACAATGTCGTGAACTTGCGCTT 54822 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 | || ||||| | ||| ||||||| ||| || || || ||||| | |||||| | | Sbjct 54821 TGTCCATCTTAGCGTCGCGAAGTGCTTTCTCAACCGGATCCATGGTTGAACGGAAAAGAT 54762 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | ||| ||||||||||| || ||||| ||||| || |||||||||| || ||| Sbjct 54761 CAGCACAAAGTTCCTCAAAGCGAGCACGCGTAATATTGGTGTAGAAATCAATTCCCTCGA 54702 Query 7296 ATAACGAATCAATTTCAAT 7314 | || |||||||| || || Sbjct 54701 ACAAAGAATCAATCTCGAT 54683 Score = 134 bits (148), Expect = 2e-26 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || ||||| | ||| ||||| ||||| || || ||||||||||| || || || ||| | Sbjct 49026 TTTTTATCTAAACCATACGCAATAGCAGCTGCAGTTGGTTCATTGATGATTCGGAGAACG 48967 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||||||||| | | |||||||||| || ||||||||||| ||||||||||| || Sbjct 48966 TTCAGGCCAGCAATGGCTCCCGCATCTTTAGTTGCTTGTCGTTGAGAATCGTTAAAATAA 48907 Query 7715 GCCGGGACCGTTACGACCGCGTCC 7738 || || || ||||| || || ||| Sbjct 48906 GCTGGCACGGTTACTACGGCATCC 48883 Score = 134 bits (148), Expect = 2e-26 Identities = 185/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||| || ||||| |||||||||||||||| || ||| |||| || | || || Sbjct 50003 CCTCATCCGGATTAATACTTTTATTCAGTTCTTTGCCAGAGAAAAAATCGGAGAGCAGTT 49944 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 ||| | ||| || || || || || || || |||||||| || |||| || || |||| Sbjct 49943 TTTGCACTTTTGGAATACGAGTTGAACCGCCAACCAAAACAATGTCATGCATTTGAGATT 49884 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 |||| || || | || || | || ||| || || || ||||| |||||| || | Sbjct 49883 TATCCATTTTAGCATCCCGCAATGCTTTCTCAACTGGATCCATGGTCGAACGGAATAAAT 49824 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | ||| || || |||||||| ||||| || ||| || || |||||| || ||| Sbjct 49823 CAGCACAAAGCTCTTCAAAACGAGCACGAGTGATGCTGGTGTAAAAATCAGTACCCTCGA 49764 Query 7296 ATAACGAATCAATTTCAAT 7314 | | |||||||||||||| Sbjct 49763 ACAGTGAATCAATTTCAAT 49745 Score = 114 bits (126), Expect = 2e-20 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || || || |||||| ||| || || ||||| || Sbjct 55636 TTCATCATCTGCTTTGTATTTCTCTGCTTCCTGTACCATCCGTTCGATCTCATCTTTTGA 55577 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 ||| | ||||||||||| || || |||||||| | ||| || | | || || | Sbjct 55576 TAAACGTCCCTTATCATTGGTGATTGTAATCTTATTTTGTTTGCCTGTAGATTTGTCCTG 55517 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| ||||| |||||||| || || |||| ||| || | || | ||||||||| Sbjct 55516 CGCAGAAACATTTAAAATACCGTTCGCGTCAATATCAAAAGTAACTTCAATTTGTGGAAC 55457 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | ||||| || | | || ||| ||||||| ||| | || || | Sbjct 55456 ACCGCGAGGAGCAGGCGGAATGCCAGACAGCTCGAATTTACCAAGCAAATTATTGTCTTT 55397 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCA 6845 | | | ||||||||||||||| || | || | ||| Sbjct 55396 GGTCATAGCACGTTCACCTTCATAAACCTGAAATTTCA 55359 Score = 107 bits (118), Expect = 2e-18 Identities = 184/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 ||| || ||| | || || ||||| || || || ||||| ||||| || || || || || Sbjct 50708 TTCGTCATCAGCCTTGTATTTTTCGGCTTCCTGTACCATTTTTTCGATTTCGTCCTTTGA 50649 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 || | || ||||| || || || ||||| || | | || || | || ||||| | Sbjct 50648 CAAACGGCCTTTATCGTTGGTGATTGTAATTTTGTTGTGCTTGCCTGTGGATTTATCCTG 50589 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| ||||||||||||||||||||||||| || || | || | |||||||| Sbjct 50588 TGCAGAGACATTCAAAATACCATTTGCATCAATGTCAAATGTAACTTCGATTTGTGGCAC 50529 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | |||||| || | | || ||| | || || || |||| || | Sbjct 50528 ACCACGAGGAGCAGGTGGAATTCCAGAAAGTTCGAATTTGCCCAGCAAGTTGTTGTCTCT 50469 Query 6808 CGCCTTCTTACGTTCACCTTCATAGAC 6834 | | || |||||||||||| || || Sbjct 50468 TGTCATCGCACGTTCACCTTCGTAAAC 50442 Score = 86.0 bits (94), Expect = 8e-12 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 7473 CCAAG-TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAAC 7531 ||||| || || || || || || | |||||||||||||||||| ||||||| ||| Sbjct 54325 CCAAGATGAGTGTCGCCAGCAGTGGATTTGACTTCAAAGATACCGTCTTCAATCGTTAGG 54266 Query 7532 AACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 | || ||||| || || |||||||| || ||||||||||| ||||| Sbjct 54265 ATTGATACATCGAAAGTTCCACCACCAAGATCAAAAATGAGAACGTT 54219 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7472 CCCAAG-TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAA 7530 |||||| || ||||| || ||||| | ||| |||||||| || || | ||||| | || Sbjct 49262 CCCAAGATGAGTATCTCCAGCGGTTGATTTCACTTCAAAAATGCCATCCTCAATAGTCAA 49203 Query 7531 CAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 | ||| || ||||| ||||| ||||| ||||||||||| | |||||| Sbjct 49202 GATCGATACGTCAAAAGTACCTCCACCAAGGTCAAAAATCAATACGTT 49155 >seq351 Length=44246 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 184231 TTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAAT 184290 |||||||| ||| ||||||||||| || | |||||| |||||||| |||||| | || Sbjct 39655 TTTACCCCGAAGAGGAAAAACACCATACTTATCACGCCCAACAACCCCAAGACCTGAAAC 39596 Query 184291 TGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGT 184350 ||| | | |||||| || ||||| || |||| |||||| ||||||| | || | | Sbjct 39595 TGCCAACGATTTTGCTGAGTCACCCTCTGTAAGAATAAGCGTACACTGCGCTGAATTCTT 39536 Query 184351 GGTACCGGCTTTATTGGCATCGTCGAGTTTTGGAATACCC 184390 ||||| || | || ||||| || |||||||| | |||| Sbjct 39535 CGTACCAGCGTCGTTAGCATCTTCCAGTTTTGGCACACCC 39496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635068667465520