Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq100 127 2e-24 seq271 123 2e-23 seq1199 104 2e-17 >seq100 Length=72284 Score = 127 bits (140), Expect = 2e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 |||||||| || || | || |||||||| ||||||||||| |||||||| |||||||| Sbjct 23702 TTACCTGCGAAAATAAGTCGTTGTTGATCAGGCGGAATGCCCTCTTTATCCTGAATTTTA 23643 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | ||| ||||||| |||||| ||||| |||| ||||| || ||| Sbjct 23642 GCCTTTACATTCTCAATAGTATCAGACGATTCCACCTCAAGGGTGATTGTTTTTCCAGTT 23583 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || || ||||||||||| Sbjct 23582 AATGTCTTCACGAATATCTGCAT 23560 >seq271 Length=49288 Score = 123 bits (136), Expect = 2e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| ||||| ||||| ||||| ||||| || ||||| || ||||||||||| |||||| Sbjct 35920 TACCAGCAAAAATCAAGCGCTGCTGATCTGGTGGAATACCCTCTTTATCTTGTATTTTTG 35861 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| |||| | ||||| || | |||||||||||| |||| ||| || || || | Sbjct 35860 CTTTCACATTTTCAATCGTGTCTGAAGCTTCCACTTCAAGGGTGATCGTCTTTCCCGTCA 35801 Query 101448 AAGTTTTTACAAATATCTGCATGGTT 101473 | || ||||| || || |||||| || Sbjct 35800 ATGTCTTTACGAAGATTTGCATGTTT 35775 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 101329 ACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTG 101388 ||| ||||| || | ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 36325 ACCGGCAAAGATTAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTTGGC 36266 Query 101389 TTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAA 101448 || ||| | || | || ||||| | |||||||| | || | ||||| || || | Sbjct 36265 CTTAACATTCTCGATGGTATCAGATGCCTCCACTTCCAATGTAATTGTTTTACCAGTAAG 36206 Query 101449 AGTTTTTACAAATATCTGCAT 101469 |||||||||||| || ||||| Sbjct 36205 AGTTTTTACAAAAATTTGCAT 36185 >seq1199 Length=19938 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 ||||||| || ||||||||||| ||||| || || ||||| ||||| || ||||| ||| Sbjct 15169 TACCTGCGAAAATCAAACGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTTTG 15228 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 ||| ||| | || | || || || | ||| || ||||| || | ||| || || || | Sbjct 15229 CTTTCACATTCTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATCGTCTTACCAGTCA 15288 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 | ||||| |||||||| ||||| Sbjct 15289 ATGTTTTAACAAATATTTGCAT 15310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396239386143846