Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq24 159 5e-34 seq271 129 8e-25 seq100 123 3e-23 seq467 120 4e-22 >seq24 Length=111638 Score = 159 bits (176), Expect = 5e-34 Identities = 188/252 (75%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 ||||||| | | || |||| ||| || | || ||||||||||| |||||||| || Sbjct 53860 GTTGAATATAAAGGCGAGACAAAAACCTTCACGCCAGAAGAAATTTCATCTATGGTTCTG 53919 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||| |||||||| || || || | || | ||| | | || || ||||| ||| | Sbjct 53920 GTTAAAATGAAGGAAACGGCTGAGGCATTTCTCGGTCATGCGGTCAAGGATGCGGTTATC 53979 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||| | || ||||| ||||| ||||| || || ||| || ||| Sbjct 53980 ACAGTCCCCGCGTACTTTAACGACTCACAGCGACAAGCGACCAAAGATTCTGGCGCAATT 54039 Query 195779 GCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 |||||||| ||| |||||| | || ||||| ||||| ||||||||||| |||||||| || Sbjct 54040 GCGGGTCTGAAC-GTCTTACGTATCATCAACGAACCGACAGCGGCTGCTATTGCTTACGG 54098 Query 195838 TCTGGACAAGAA 195849 ||| ||||| || Sbjct 54099 TCTAGACAAAAA 54110 Score = 129 bits (142), Expect = 8e-25 Identities = 181/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 ||||||||||| ||||| || |||||||| ||||| || | |||||| ||||| || ||| Sbjct 54686 GAGATTGATTCTTTGTTCGAGGGAATTGATTTCTACACCAATATTACGCGTGCTCGCTTT 54745 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 || || | ||||| | || | ||||| || ||||| ||| |||||| Sbjct 54746 GAGGAACTTTGTGCTGATCTTTTCCGTTCAACCATGGATCCGGTTGAGAAAGCACTTCGC 54805 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 ||||| |||||||| || | | ||| | || ||||| || || || |||||||||||| Sbjct 54806 GACGCTAAGATGGACAAAGCGCAAGTTCACGACATTGTACTAGTTGGTGGATCAACCCGT 54865 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 || ||||| | || || |||| || ||||| | |||||| | || |||| Sbjct 54866 ATCCCGAAAGTACAGAAGTTGCTGTCAGATTTCTTTTCTGGTAAAGAGCTCAATAAAAGC 54925 Query 196373 ATCAACCCGGATGA 196386 |||||||| ||||| Sbjct 54926 ATCAACCCAGATGA 54939 Score = 114 bits (126), Expect = 2e-20 Identities = 190/272 (70%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663 |||| || |||||||| ||||| | | || | || || || || | ||||| | ||| Sbjct 55365 TTCAGGTTTATGAAGGTGAACG-TGCTATGACCAAAGACAATAATTTGCTTGGTAAATTC 55423 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 || || | || ||||| |||| || | ||||||||||| ||| | ||| || ||| Sbjct 55424 GAGCTGTCTGGCATTCCGCCTGCTCCTCGCGGTGTTCCACAAATTGAAGTTACTTTTGAT 55483 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || ||||| || || ||| |||| || | || ||||||| || | |||||| | Sbjct 55484 ATTGACGCGAACGGTATTTTAAATGTTTCTGCGCAGGACAAATCTACAGGCAAACAAAAT 55543 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 |||||| || |||||||| ||||| || | || || || || || ||||| ||||| Sbjct 55544 AAGATTACAATCACCAATGATAAGGGACGTTTATCAAAAGATGAGATCGAACGGATGGTA 55603 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 || || || || || |||| | ||| || || Sbjct 55604 CAGGAAGCAGAGAAATACAAAGCAGATGATGA 55635 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 196388 GCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAAC 196447 || || ||||||||||| || || || || || ||| | ||||| | | | | | Sbjct 50112 GCCGTAGCTTATGGTGCTGCAGTGCAAGCAGCAATTTTATCAGGCGATAAATCGGACACT 50171 Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507 || |||||| | || ||| | ||||||||||| |||| ||||| | |||||||| ||| Sbjct 50172 GTACAAGATTTACTTCTATTGGATGTTGCACCGCTATCGTTGGGTATCGAAACAGCTGGT 50231 Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTC 196567 || || |||||| | || | || ||||||||||| || || || | ||| Sbjct 50232 GGAGTAATGACTGCGTTAATAAAAAGAAACACAACTATCCCAACGAAAACATCGCAAACA 50291 Query 196568 TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 || | || |||||||| ||||| ||||| || | ||||| || Sbjct 50292 TTCACTACCTATTCCGACAATCAGCCAGGAGTACTGATTCAGGT 50335 Score = 96.9 bits (106), Expect = 5e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 195707 GATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGAC 195766 ||||| || || || || || ||||| || | ||||| |||||||| || || || || Sbjct 48884 GATGCCGTAGTAACCGTGCCAGCTTATTTTAACGATTCTCAACGACAAGCAACTAAAGAT 48943 Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 || | || ||||| || || ||| ||| |||| |||||||||||||| || ||||| Sbjct 48944 GCGGGAGCCATTGCTGGCCTGAACGTTCTCCGAATCATCAATGAACCAACTGCAGCTGCT 49003 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 ||||| |||||| | || || || Sbjct 49004 ATTGCGTATGGTTTAGATAAAAA 49026 Score = 93.3 bits (102), Expect = 6e-14 Identities = 174/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 |||| |||||||| |||| || || | ||| || || || | || || ||||| |||| Sbjct 49746 TTGAAATTGATTCACTGTTCGAGGGTACTGATTTTTACACCAGCATCACTCGTGCTCGTT 49805 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 |||||||| | ||||||| || | | ||||| || ||||| ||| | | | Sbjct 49806 TTGAAGAGCTTTGTGCTGATTTATTCCGTTCGACCATGGATCCAGTTGAGAAAGCATTGC 49865 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 | || || || |||||||| ||| | | |||| ||||| | || || || ||||| | Sbjct 49866 GGGATGCTAAAATGGATAAATCTCAAATGCATGACATTGTTTTGGTTGGCGGTTCAACTC 49925 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370 ||||||| || | ||| | |||| || || ||| | ||||| | || |||| Sbjct 49926 GTATTCCAAAAGTGCAAAAACTGCTCTCCGATTTTTTCTCTGGCAAAGAACTGAATAAAA 49985 Query 196371 CGATCAACCCGGATGA 196386 || || |||||||| Sbjct 49986 GTATTAATCCGGATGA 50001 >seq271 Length=49288 Score = 129 bits (142), Expect = 8e-25 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| |||||||| || | || || || || ||||| || || |||||| Sbjct 36590 GTGGTATGCAAATTTTTGTGAAGACGTTAACAGGCAAGACGATCACTCTAGAAGTTGAGG 36649 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || | || ||||||||||| || || ||||| |||||||| | Sbjct 36650 CTTCTGACACGATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCACCAG 36709 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACA 172007 ||||||| || ||||||||||| ||||| || Sbjct 36710 ATCAGCAGCGTCTTATTTTTGCCGGTAAGCA 36740 Score = 123 bits (136), Expect = 3e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| ||||| ||||| |||||||| ||||| || || | || || ||| Sbjct 36180 GTGGTATGCAAATTTTTGTAAAAACTCTTACTGGTAAAACAATTACATTGGAAGTGGAGG 36239 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || ||||| || | || ||||| || || ||||||||||| |||||||| | Sbjct 36240 CATCTGATACCATCGAGAATGTTAAGGCCAAAATCCAGGATAAGGAAGGAATTCCACCAG 36299 Query 171977 ATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| ||||| || ||||| ||| Sbjct 36300 ATCAGCAGCGACTAATCTTTGCCGGT 36325 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || ||||| || || |||||||| |||||||| || || ||||| || |||| Sbjct 36926 ATGCAGATTTTTGTTAAGACACTTACTGGCAAAACTATAACACTGGAGGTGGAAGCGTCG 36985 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || | || || ||||| || ||||| || || || ||||| || ||| Sbjct 36986 GATACGATCGAGAATGTGAAGGCTAAGATCCAGGATAAAGAGGGTATCCCACCTGACCAG 37045 Query 171982 CAACGACTTATTTTTGCTGGT 172002 |||||||||||||| || ||| Sbjct 37046 CAACGACTTATTTTCGCGGGT 37066 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || | || ||||| || |||||||| || || || | ||| Sbjct 35779 ATGCAAATCTTCGTAAAGACATTGACGGGAAAGACGATCACCCTTGAAGTGGAAGCTTCA 35838 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | ||||| || || |||||||| || || |||||||| |||||| Sbjct 35839 GACACGATTGAAAATGTGAAAGCAAAAATACAAGATAAAGAGGGTATTCCACCAGATCAG 35898 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 || || | ||||||||||||| Sbjct 35899 CAGCGCTTGATTTTTGCTGGTA 35920 >seq100 Length=72284 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||| || | ||||||||||| |||||||| ||||| || ||||| Sbjct 23560 ATGCAGATATTCGTGAAGACATTAACTGGAAAAACAATCACCCTTGAGGTGGAATCGTCT 23619 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||| ||||| || |||||||| || ||||| Sbjct 23620 GATACTATTGAGAATGTAAAGGCTAAAATTCAGGATAAAGAGGGCATTCCGCCTGATCAA 23679 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 |||||||||||||| || ||||| Sbjct 23680 CAACGACTTATTTTCGCAGGTAA 23702 >seq467 Length=38392 Score = 120 bits (132), Expect = 4e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 || ||||| ||||| || || | ||||| | || ||||| || | ||| ||| | Sbjct 32692 TTCGCTCCTGAAGAGATATCAGCAATGGTTCTCGGAAAAATGAAAGAAATTGCTGAAGCA 32751 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | |||| || |||||| |||| ||||| || |||||||||||||| | |||| | Sbjct 32752 TATTTGGGAAAGGAAGTGAAACATGCGGTTGTCACGGTACCTGCTTACTTTAATGATGCT 32811 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| || || || || || |||| | ||||||| ||||| || | | | |||||| Sbjct 32812 CAACGTCAAGCTACTAAAGATGCTGGTACTATTGCCGGTCTCAATGTTGTCCGTATTATC 32871 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 |||||||| || || || || || ||||| || |||| ||||| Sbjct 32872 AATGAACCTACGGCTGCCGCTATCGCTTACGGCTTGGATAAGAA 32915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657795972344160