Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1199 104 3e-17 seq271 100 4e-16 seq100 93.3 6e-14 >seq1199 Length=19938 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| |||||||||||||||| || || ||||| | || |||||| || Sbjct 15310 ATGCAAATATTTGTTAAAACATTGACTGGTAAGACGATTACGCTTGAGGTCGAATCCTCG 15251 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| || || || || ||||| |||||||||||||| || Sbjct 15250 GATACGATTGAGAATGTGAAAGCAAAGATTCAGGACAAAGAGGGCATACCTCCAGATCAG 15191 Query 155943 CAAAGATTGATTTATGCCGGTA 155964 || | ||||||| || |||| Sbjct 15190 CAGCGTTTGATTTTCGCAGGTA 15169 >seq271 Length=49288 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || |||||||| ||||| || || || | ||||| |||| | Sbjct 35776 AACATGCAAATCTTCGTAAAGACATTGACGGGAAAGACGATCACCCTTGAAGTGGAAGCT 35835 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| ||| |||||| ||||||||||||||||| || || || ||||| Sbjct 35836 TCAGACACGATTGAAAATGTGAAAGCAAAAATACAAGATAAAGAGGGTATTCCACCAGAT 35895 Query 155940 CAACAAAGATTGATTTATGCCGGTA 155964 || || | ||||||| ||| |||| Sbjct 35896 CAGCAGCGCTTGATTTTTGCTGGTA 35920 >seq100 Length=72284 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| ||||| | || ||||| ||||||||||| || || | || || ||| Sbjct 23557 AAAATGCAGATATTCGTGAAGACATTAACTGGAAAAACAATCACCCTTGAGGTGGAATCG 23616 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||||| |||| || || || |||||| || |||||||| ||||| || || || Sbjct 23617 TCTGATACTATTGAGAATGTAAAGGCTAAAATTCAGGATAAAGAGGGCATTCCGCCTGAT 23676 Query 155940 CAACAAAGATTGATTTATGCCGGTAA 155965 |||||| || | |||| || ||||| Sbjct 23677 CAACAACGACTTATTTTCGCAGGTAA 23702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731798099224800