Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1199 100 3e-16 seq271 86.0 6e-12 >seq1199 Length=19938 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||| || | |||| ||| |||||||| ||||||||||| |||||||| ||| ||| Sbjct 15169 TACCTGCGAAAATCAAACGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTTTG 15228 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | || | ||| || | || ||| || |||| || | |||||| || |||| Sbjct 15229 CTTTCACATTCTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATCGTCTTACCAGTCA 15288 Query 137390 ATGTTTTTACGAATATTTGCATA 137412 ||||||| || |||||||||||| Sbjct 15289 ATGTTTTAACAAATATTTGCATA 15311 >seq271 Length=49288 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 137266 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATT 137325 || ||||| ||| | || ||||| |||||||| || || || ||||||||||| ||| Sbjct 36740 TGCTTACCGGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATC 36681 Query 137326 TTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCG 137385 || |||| | ||| | |||||| | | || ||||| | ||| | ||||||||| Sbjct 36680 TTGGCCTTTACATTTTCAATCGTGTCAGAAGCCTCAACTTCTAGAGTGATCGTCTTGCCT 36621 Query 137386 GTCAATGTTTTTACGAATATTTGCATA 137412 || || || || || || ||||||||| Sbjct 36620 GTTAACGTCTTCACAAAAATTTGCATA 36594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488494669269600