Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1199 82.4 5e-11 >seq1199 Length=19938 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 33610 CCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGT 33669 || || ||||||||||||||||||||| | || | || |||||||| ||| || || Sbjct 15171 CCTGCGAAAATCAAACGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTT-TGC 15229 Query 33670 TTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728 || |||| || | || || ||||| || |||| ||| ||||| ||||| || || Sbjct 15230 TTTCACATTCTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATCGTCTTACCAGTCAA 15289 Query 33729 CGTTTTTACAAAGATCTGCATA 33750 ||||| ||||| || |||||| Sbjct 15290 TGTTTTAACAAATATTTGCATA 15311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328671638885760