Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq100 86.0 6e-12 seq271 82.4 7e-11 >seq100 Length=72284 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || || || |||||||| |||||| | ||||| | || || ||| | Sbjct 23556 CAAAATGCAGATATTCGTGAAGACATTAACTGGAAAAACAATCACCCTTGAGGTGGAATC 23615 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 |||||||| ||| | ||||| |||||| ||||||||||| || ||||| || Sbjct 23616 GTCTGATACTATTGAGAATGTAAAGGCTAAAATTCAGGATAAAGAGGGCATTCCGCCTGA 23675 Query 25291 TCAGCAAAGACTCATTTACG 25310 ||| ||| |||| |||| || Sbjct 23676 TCAACAACGACTTATTTTCG 23695 >seq271 Length=49288 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 ||||||||| | || ||||| ||||| || ||||| ||||||| | ||||| ||||| Sbjct 35776 AACATGCAAATCTTCGTAAAGACATTGACGGGAAAGACGATCACCCTTGAAGTGGAAGCT 35835 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 || || || || | || ||| |||||| |||||||||||||| || || ||| Sbjct 35836 TCAGACACGATTGAAAATGTGAAAGCAAAAATACAAGATAAAGAGGGTATTCCACCAGAT 35895 Query 25292 CAGCA 25296 ||||| Sbjct 35896 CAGCA 35900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445049456592960