Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq24 154 4e-32 seq467 136 1e-26 seq271 136 1e-26 seq100 134 4e-26 seq74 134 4e-26 seq888 105 2e-17 seq2591 91.5 4e-13 >seq24 Length=111638 Score = 154 bits (170), Expect = 4e-32 Identities = 199/272 (73%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 349478 GGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGA 349536 |||| |||||||| | |||||||||||||||| || |||||||| || || || Sbjct 53839 GGTGGTAAACCAAAAGTGCAGGTTGAATATAAAGGCGAGACAAAAAC-CTTCACGCCAGA 53897 Query 349537 AGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGA 349596 |||||||||||| |||||| | |||||||||||||||| ||||| |||| | | ||| | Sbjct 53898 AGAAATTTCATCTATGGTTCTGGTTAAAATGAAGGAAACGGCTGAGGCATTTCTCGGTCA 53957 Query 349597 AACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGC 349656 | || | ||||| ||||| || || || || || ||||| || | ||||| || Sbjct 53958 TGCGGTCAAGGATGCGGTTATCACAGTCCCCGCGTACTTTAACGACTCACAGCGACAAGC 54017 Query 349657 AACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCAC 349716 || |||||| ||||| |||||||| | || || || | || || || ||||| || Sbjct 54018 GACCAAAGATTCTGGCGCAATTGCGGGTCTGAACGTCTTACGTATCATCAACGAACCGAC 54077 Query 349717 TGCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 || || || ||||| || || || || |||| Sbjct 54078 AGCGGCTGCTATTGCTTACGGTCTAGACAAAA 54109 Score = 116 bits (128), Expect = 1e-20 Identities = 183/260 (70%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCT--ATTACACGTGCT 350086 ||||||||||||||| || || || | ||||| || || | || || |||||| Sbjct 49744 TATTGAAATTGATTCACTGTTCGAGGGTACTGATTT--TTACACCAGCATCACTCGTGCT 49801 Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 || |||||||| | ||| ||| | || | | || |||||||| || || |||| | Sbjct 49802 CGTTTTGAAGAGCTTTGTGCTGATTTATTCCGTTCGACCATGGATCCAGTTGAGAAAGCA 49861 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 || ||||| |||||| ||| ||| || |||| | ||||| ||||| ||||| Sbjct 49862 TTGCGGGATGCTAAAATGGATAAATCTCAAATGCATGACATTGTTTTGGTTGGCGGTTCA 49921 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || |||||||||||||| ||| | | || || || ||||| ||||||||||| | Sbjct 49922 ACTCGTATTCCAAAAGTGCAAAAACTGCTCTCCGATTTTTTCTCTGGCAAAGAACTGAAT 49981 Query 350267 AGATCAATTAATCCAGATGA 350286 | | |||||||| ||||| Sbjct 49982 AAAAGTATTAATCCGGATGA 50001 Score = 104 bits (114), Expect = 7e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 |||||| ||||||| ||||||||||||||||| || || |||||||| | |||||||| Sbjct 48044 AGGTAATCGAACAACTCCATCATACGTTGCATTCACTGATACTGAGCGCTTAATTGGTGA 48103 Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTT 349386 | | |||||||| |||| |||| |||||| | ||||| ||||| Sbjct 48104 TGCGGCAAAAAACCAAGTTGCTATGAATCCACATAATACTGTTTT 48148 Score = 98.7 bits (108), Expect = 3e-15 Identities = 212/314 (68%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 182753 TTCAAGATTATTTTTAGCCTCAATACT-TCCTTTAAA--TTCCTCATCTTCTTTAGCATA 182809 ||| ||| ||||||||| |||| | |||||| ||| |||||| |||| || Sbjct 55675 TTCGAGAGCATTTTTAGCAGCAATGCGATCCTTTTGTGCTTCATCATCTGCTTTG---TA 55619 Query 182810 CTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATT 182869 || || || ||| | ||| | ||| || |||||||| || | | | || |||||| Sbjct 55618 TTTCTCTGCTTCCTGTACCATCCGTTCGATCTCATCTTTTGATAAACGTCCCTTATCATT 55559 Query 182870 TGTAATTACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAAT 182929 || ||| | ||| | | || || ||||| || | || |||||||||||| Sbjct 55558 GGTGATTGTAATCTTATTTTGTTTGCCTGTAGATTTGTCCTGCGCAGAAACATTTAAAAT 55499 Query 182930 ACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGG 182989 ||| || | ||||| |||||| | |||||||| ||||||||||| || || || || Sbjct 55498 ACCGTTCGCGTCAATATCAAAAGTAACTTCAATTTGTGGAACACCGCGAGGAGCAGGCGG 55439 Query 182990 AATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCC 183049 ||| |||| | |||| ||| | |||||| ||||| || | || | || || Sbjct 55438 AATGCCAGACAGCTCGAATTTACCAAGCAAATTATTGTCTTTGGTCATAGCACGTTCACC 55379 Query 183050 TTCATATACTTGAA 183063 |||||| || |||| Sbjct 55378 TTCATAAACCTGAA 55365 Score = 96.9 bits (106), Expect = 1e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 183691 CACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATAT 183750 |||| || | ||| || ||||||||||| | ||| |||||||| || ||||||||||| Sbjct 54330 CACCTCCAAGATGAGTGTCGCCAGCAGTGGATTTGACTTCAAAGATACCGTCTTCAATCG 54271 Query 183751 TTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 ||| ||||||||||| || || |||||||| | ||||||| Sbjct 54270 TTAGGATTGATACATCGAAAGTTCCACCACCAAGATCAAAA 54230 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 |||| || | |||||||||||||||| || ||||| |||||| ||||| |||| Sbjct 55365 TTCAGGTTTATGAAGGTGAACGTGCTATGACCAAAGACAATAATTTGCTTGGTAAATTCG 55424 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 || || ||||| || ||| | || ||||| || |||||||| |||| |||| Sbjct 55425 AGCTGTCTGGCATTCCGCCTGCTCCTCGCGGTGTTCCACAAATTGAAGTTACTTTTGATA 55484 Query 350625 TTGATTCAAATGGTATTTTAAATGTTAC--CGCAGTTGAAAAATCAAGTGGTAAAAGTAG 350682 |||| | || ||||||||||||||| | ||||| || ||||| | || ||| | Sbjct 55485 TTGACGCGAACGGTATTTTAAATGTTTCTGCGCAG--GACAAATCTACAGGCAAACAAAA 55542 Query 350683 TAAGGTAGAAATTACTAATGATAA 350706 |||| | ||| || |||||||| Sbjct 55543 TAAGATTACAATCACCAATGATAA 55566 Score = 87.8 bits (96), Expect = 5e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 |||||||| | ||||| ||||||||||| ||||| | | || |||| || || ||| Sbjct 49164 ATTTTTGACCTTGGTGGAGGTACTTTTGACGTATCGATCTTGACTATTGAGGATGGCATT 49223 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 |||||||| ||| |||| ||||| ||||| |||||||| || Sbjct 49224 TTTGAAGTGAAATCAACCGCTGGAGATACTCATCTTGGGGG 49264 >seq467 Length=38392 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| || ||| |||||||| | | |||||||| |||||||||||||||||||| Sbjct 32698 CCTGAAGAGATATCAGCAATGGTTCTCGGAAAAATGAAAGAAATTGCTGAAGCATATTTG 32757 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | ||| | |||| ||| | || ||||| || || ||||||||||| || ||| Sbjct 32758 GGAAAGGAAGTGAAACATGCGGTTGTCACGGTACCTGCTTACTTTAATGATGCTCAACGT 32817 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||||||||| | ||||| || | |||||| | | || || |||||| Sbjct 32818 CAAGCTACTAAAGATGCTGGTACTATTGCCGGTCTCAATGTTGTCCGTATTATCAATGAA 32877 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 || || ||||| || || || || || | ||||| Sbjct 32878 CCTACGGCTGCCGCTATCGCTTACGGCTTGGATAA 32912 Score = 89.7 bits (98), Expect = 2e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 349766 AATATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||||||||| |||| ||| | || ||||||||||||||||| || | ||||| |||| Sbjct 33192 AATATTCTTGTTTTCGATCTTGGCGGTGGTACTTTTGATGTGTCGATGCTAACGATTGAT 33251 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 | || |||| ||||| ||| || ||| ||||| || | ||||| ||||||||| Sbjct 33252 AATGGTGTTTTCGAAGTGCTAGCTACCAATGGAGATACTCACTTGGGTGGTGAAGATTTT 33311 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAG 349924 || | || | | |||||| |||||| ||| ||| Sbjct 33312 GACCAGCGAGTTATGGAGCATTTCATTAAAGTATTCAAG 33350 >seq271 Length=49288 Score = 136 bits (150), Expect = 1e-26 Identities = 114/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||||||||| || |||||||| || ||||||||||| |||||||| ||||| || Sbjct 36324 CCGGCAAAGATTAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTTGGCC 36265 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | |||||||| || ||||| | ||||| ||| || || || || Sbjct 36264 TTAACATTCTCGATGGTATCAGATGCCTCCACTTCCAATGTAATTGTTTTACCAGTAAGA 36205 Query 140718 GTTTTTACAAAAATCTGCAT 140737 |||||||||||||| ||||| Sbjct 36204 GTTTTTACAAAAATTTGCAT 36185 Score = 129 bits (142), Expect = 2e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || || ||||| || ||||| |||||||| || |||||||||||||| |||||||| Sbjct 36740 TGCTTACCGGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATC 36681 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || |||||||| ||||||| ||||| | |||||||| || || | ||||| || Sbjct 36680 TTGGCCTTTACATTTTCAATCGTGTCAGAAGCCTCAACTTCTAGAGTGATCGTCTTGCCT 36621 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || |||||||| ||||| Sbjct 36620 GTTAACGTCTTCACAAAAATTTGCAT 36595 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || || || || |||||||| ||||| || || || ||||||||||| || ||||| Sbjct 37065 CCCGCGAAAATAAGTCGTTGCTGGTCAGGTGGGATACCCTCTTTATCCTGGATCTTAGCC 37006 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || |||| ||| || | ||| || || ||||| | || || || || ||| Sbjct 37005 TTCACATTCTCGATCGTATCCGACGCTTCCACCTCCAGTGTTATAGTTTTGCCAGTAAGT 36946 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||||||||| Sbjct 36945 GTCTTAACAAAAATCTGCAT 36926 >seq100 Length=72284 Score = 134 bits (148), Expect = 4e-26 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || || || || || ||||| |||||||| ||||| || |||||||||||||||||| Sbjct 23702 TTACCTGCGAAAATAAGTCGTTGTTGATCAGGCGGAATGCCCTCTTTATCCTGAATTTTA 23643 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || |||||||| ||||| | |||||| | ||| || ||||| || | ||| ||||| ||| Sbjct 23642 GCCTTTACATTCTCAATAGTATCAGACGATTCCACCTCAAGGGTGATTGTTTTTCCAGTT 23583 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | ||| || || || ||||||||| Sbjct 23582 AATGTCTTCACGAATATCTGCATT 23559 >seq74 Length=81447 Score = 134 bits (148), Expect = 4e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799 ||||| | ||| ||||||||||| ||||| ||||| || ||||||| ||| |||||| | Sbjct 15595 CCTCCGATCATCACAAAATCAGCGCCTGCACCAAAAGCCTTCGCAACATCTCCGGGATTT 15536 Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859 | || || ||||| || |||||||| || | ||||||| ||||||||||| || Sbjct 15535 GTGCATCCTCCATCGCTCATCACATGTCCGTTCAGACCATGTGAAGCATCAGCACATTCA 15476 Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAACAGCA 130919 | |||| ||||||||||| |||||||||| | || | ||| |||||||| | | Sbjct 15475 AGCACAGCACTCAGTTGTGGATAACCAACTCCAGCTTTCTTCCGTGTCGTACAAACTGAA 15416 Query 130920 CCTGGACCAATACC 130933 || ||||| || || Sbjct 15415 CCAGGACCTATGCC 15402 >seq888 Length=25167 Score = 105 bits (116), Expect = 2e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 378184 TCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTT 378243 ||||| | ||||||| | ||| | |||||||||||||| || ||| || |||||| Sbjct 7892 TCATAATTCACCATTACACTTTCCATAGCTTTAATAAGTCGACGTTGAATGTAGCCAGTT 7833 Query 378244 TGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAAT 378303 | ||||| || |||||||| || | ||| ||||||||||||| |||||||| || Sbjct 7832 TCTGCTGTTTTTACAGCAGTATCGATAAGACCTTCACGACCACCCATAGCATGGAAAAAG 7773 Query 378304 AATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 ||||| | ||||| ||||| | | | |||| |||||| || ||| Sbjct 7772 AATTCGGATGGAGTTAGTCCTGCCAGATATGAGTTCTCAACGAAACCT 7725 >seq2591 Length=8330 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836 ||||||| || | ||| || ||| | | | ||||||| |||||||||||||||| | Sbjct 8015 ATCCACCGGCACAGTGTAGTGCAGGACCAGTTGGTGATGATCTTTTTCATTGGCAAGCCA 7956 Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896 | || ||||| ||| ||| | || |||||||||||| | ||| | | |||| | | Sbjct 7955 CTATAATGGGTCCACCAGAATCACCATATCAAGGTGGTGTGTTTTTCCTGACAATTCACT 7896 Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTA 54931 | || |||||||| |||||||| ||||| ||| Sbjct 7895 TCCCGACCGATTATCCGTTTAAACCACCAAAGGTA 7861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515097572116634