Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq351 82.4 8e-11 >seq351 Length=44246 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 118157 ACCTGTTTTATGGTGGCGTCC-CGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCC 118215 |||||||| ||| | || | | |||||||| || |||||||| || ||||| || || Sbjct 39690 ACCTGTTT-ATGATTGCCTTCTCGAACGTTAAGCATTTTACCCCGAAGAGGAAAAACACC 39632 Query 118216 AAACTTGTCACGGCCCACAACGCTCAAG-CCGGCAATAGCAAGGGCCTTCGCCGAGTCAC 118274 | |||| ||||| || ||||| | |||| || | || || | | || || ||||||| Sbjct 39631 ATACTTATCACGCCCAACAACCC-CAAGACCTGAAACTGCCAACGATTTTGCTGAGTCAC 39573 Query 118275 CCTCGGTAATAATAAGAGTGCACTCGGTGCTG--CGATGAGTACCGGCCCAATTAGCATC 118332 |||| |||| |||||| || |||| | |||| | ||||| || |||||||| Sbjct 39572 CCTCTGTAAGAATAAGCGTACACT--GCGCTGAATTCTTCGTACCAGCGTCGTTAGCATC 39515 Query 118333 ATCCAGCTTCGGAACGCCC 118351 ||||| || || || ||| Sbjct 39514 TTCCAGTTTTGGCACACCC 39496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547160744864400